Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03-
01] 23 sequences; 37,316,984 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq7 163 4e-35
>seq7
Length=2824016
Score = 163 bits (180), Expect = 4e-35
Identities = 372/557 (67%), Gaps = 6/557 (1%)
Strand=Plus/Minus
Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019
|| || || ||| ||||||||||||||| | | || || |||||||| || || ||
Sbjct 1203129 CAAGCAAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGG 1203070
Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079
|| ||||| || || | ||| || ||||| || ||||| ||||| | || ||||||
Sbjct 1203069 CCAGGCATGAGACCTCTCTTCTTGAGCCAGAAGATGGAGGCAAAGGCTCCGCTGAAGAAG 1203010
Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCA---TAACTGGCGCTGTCATGT 50136
|| || || || || |||||||||||||| | || || || | | |||| ||
Sbjct 1203009 ATACCCTCGACGGCAGCAAAGGCAACAAGGCGCTGAGCAAAGGAAGAGTCCTTGTCCTGG 1202950
Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196
|||||||| ||||| || |||||||| | ||||| || || || ||||| ||
Sbjct 1202949 ATCCACTTGATGGCCCAGTCAGCCTTCTTACGGATGCAAGGAATGGTCTCAATGGCGTTG 1202890
Query 50197 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 50256
||||| ||||| | | || || || || || ||||| | || || |
Sbjct 1202889 AAGAGGTAGTTGCGCTGGCTGTGCTCCTTGACGTAGGTGTCGATGAGCAGGGAGTAGGTC 1202830
Query 50257 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 50316
|| || || ||||| || || ||||| || |||||||| |||| |||||||| |||
Sbjct 1202829 TCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCGGGGATC 1202770
Query 50317 TGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 50376
|| || || | || || || | | || || || || || ||||| ||| |||
Sbjct 1202769 TGAACCTCGCCGCTGAAACGCTCGACCAGGTTCTCGTTGACAATGCCGTCGGAGGCAGCA 1202710
Query 50377 AAAAACGCCAATACATGTTTTATAAAATGTTTTTCGT--TGGGT-GTTAGTTTATTCCAA 50433
|| || ||||| | || || || | || |||| | | | | || |||||
Sbjct 1202709 AAGAAAGCCAAGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCCAG 1202650
Query 50434 TCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 50493
|| | | ||| || || | ||| | ||||| | ||||| || || ||||| ||||||
Sbjct 1202649 TCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCAGAAGGAAGCCTCGGCCTTT 1202590
Query 50494 TTATACATATTCCAGAT 50510
|| ||||| | ||||||
Sbjct 1202589 TTGTACATTTGCCAGAT 1202573
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268593497720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |