Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03- 01] 23 sequences; 37,316,984 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq8 93.3 4e-14 >seq8 Length=2205689 Score = 93.3 bits (102), Expect = 4e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 5593 CAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAACAG 5652 |||||| || | ||||||||| ||| | |||| | ||| || || |||||| || Sbjct 369549 CAGCTGAGCAACCCGGTCGCCCTCCTTGATCTCGTAGTCGGCGTCTGCGTGGTTGAAGAG 369490 Query 5653 CACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAA 5712 | ||| ||| |||||||| || ||||| || ||||| ||||| ||||||||| Sbjct 369489 AAGCACCTTGACGGGTCCGCGGTAATCTGCGTCGATGACGCCGGCGCCGGTGTCGATGAA 369430 Query 5713 GTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753 ||||||| || ||||| ||||| ||||| | ||||||| Sbjct 369429 GTGCTTGGAGGCGAGGCCAGAGCGAGGAGCAATTCGGCCGT 369389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430054279450376