Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03-
01] 23 sequences; 37,316,984 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq7 113 7e-21
seq5 113 7e-21
>seq7
Length=2824016
Score = 113 bits (124), Expect = 7e-21
Identities = 87/101 (86%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || |||||||| || || |||||||| |||||
Sbjct 573827 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGCATTACCAAGCCCGCTAT 573769
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| |||||||||||||| ||||||||| ||||||
Sbjct 573768 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 573728
>seq5
Length=3842235
Score = 113 bits (124), Expect = 7e-21
Identities = 87/101 (86%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || |||||||| || || |||||||| |||||
Sbjct 1155939 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGCATTACCAAGCCCGCTAT 1155881
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| |||||||||||||| ||||||||| ||||||
Sbjct 1155880 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 1155840
Score = 84.2 bits (92), Expect = 3e-12
Identities = 117/164 (71%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| ||||||| |||| ||| | || ||||||| || || |||| ||| |
Sbjct 1155763 TGATCTACGAAGAGACCCGTGGTGTCCTCAAATCCTTCCTCGAGGGTGTCATCCGTGACG 1155704
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || ||| ||||||||||| || || ||||| |||||||| |||| ||||||| |
Sbjct 1155703 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACCTCGCTGGACGTCGTCTACG 1155644
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | || || || ||||| | | || ||||| || |||||
Sbjct 1155643 CTCTCAAGCGACAGGGCCGCACCCTGTACGGTTTCGGTGGTTAA 1155600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075178970939
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |