Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03-
01] 23 sequences; 37,316,984 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq7 87.8 2e-12
>seq7
Length=2824016
Score = 87.8 bits (96), Expect = 2e-12
Identities = 151/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 104589 TTTGTATTCGCCTACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATT 104648
|| ||| ||||| || || || || || || || |||||||| |||| || || || |
Sbjct 1203418 TTGGTACTCGCCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTC 1203359
Query 104649 CATAAATTCGAAAGGATTCAAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAG 104708
||| || || || || || | | ||| || || |||| |||||| ||| | |||
Sbjct 1203358 CATGAAGTCAAAGGGGTTGGAGGACTTGTAAATCTTCTCGTTGCCAAGAGCGACGAGCAG 1203299
Query 104709 TCGATCCGCCACAAATTCGATGTACTCGCACAT-AGAATGTGCATTCATGCCCAGCATTG 104767
||||| || ||||| || ||||||| ||| || || || ||||||||||||| |
Sbjct 1203298 ACGATCGGCAACAAACTCAATGTACTGCTTCATCAGGGTG-GCGTTCATGCCCAGCAGAG 1203240
Query 104768 CGACGGGTAAAGCGTTAGTaaaaaaaTCTTTCTCGAT 104804
| ||| | ||| | || || || |||| ||||||
Sbjct 1203239 CACAGGGGAGAGCCTCGGTCAAGAATTCTTGCTCGAT 1203203
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429935879483565
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |