Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03-
01] 23 sequences; 37,316,984 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq6 143 3e-29
seq7 138 1e-27
seq1 131 2e-25
>seq6
Length=3085841
Score = 143 bits (158), Expect = 3e-29
Identities = 162/217 (75%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | || | ||| |||||||| || |||||||||||||||
Sbjct 760441 CCACCACGAAGACGAAGGACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCGCTC 760500
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| |||||||| || || |||| | |||||||||||| ||||||
Sbjct 760501 AGGGTGCGACCGTCCTCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGGAGGG 760560
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | ||||||| |||||||
Sbjct 760561 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCGGATGACTCGACC 760620
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
|||| || | ||| || ||||| ||||| || ||||
Sbjct 760621 TCGAGAGTGATGGTCTTGCCGGTGAGAGTCTTGACGA 760657
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||||| || | || | ||| |||||||| || |||||||| ||||||
Sbjct 1398505 CCACCACGCAGGCGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 1398446
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| |||||||| || || |||| || |||||||||||||| ||
Sbjct 1398445 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATCAATCGCTGCTGGTCCGGGGGA 1398386
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || |||| ||||| |
Sbjct 1398385 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 1398326
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | || || || || || || || ||||||||||||||
Sbjct 1398325 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 1398279
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || | || | ||| |||||||| || |||||||| ||| |
Sbjct 760721 CCACCACGGAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 760780
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||||| || |||||||| ||| |||| | |||||||||||| |||||
Sbjct 760781 AGAGTTCGGCCATCCTCGAGTTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGA 760840
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||| | | || | ||| |||| ||||| |
Sbjct 760841 ATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATAGTGTCGGAAGACTCCACC 760900
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|||| ||| | ||| || ||||| || || || ||||| || ||||||
Sbjct 760901 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCATG 760948
Score = 113 bits (124), Expect = 4e-20
Identities = 164/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| |||| || || || || || | ||| |||||| || |||||||| |||||
Sbjct 760212 GCCACCACGCAGGCGGAGGACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCT 760271
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| |||||| ||| || |||||||| || ||| |||| | ||||||||||| || ||
Sbjct 760272 CAGGGTGCGACCGTCTTCCAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGGGG 760331
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185
||| || || ||||| ||| | | || ||||| | || | ||||| | ||||| |
Sbjct 760332 GATACCCTCCTTGTC-CTGAATCTTTGACTTGACGTTGTCGATGGTATCAGATGACTCCA 760390
Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | || || ||||| | ||| || || || ||||||||
Sbjct 760391 CTTCCAGTGTGATTGTCTTGCCGGTCAAAGTCTTGACAAAGATCTGCAT 760439
>seq7
Length=2824016
Score = 138 bits (152), Expect = 1e-27
Identities = 348/521 (67%), Gaps = 21/521 (4%)
Strand=Plus/Plus
Query 46084 ATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCG 46143
|| || ||| | || ||||| | |||||||| || ||||||||| | || | |
Sbjct 1202906 ATTCCTTGCATCCGTAAGAAGGCTGACTGGGCCATCAAGTGGATCCAGGACAAGGACTCT 1202965
Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGT 46203
| || || |||| | || |||||||| || ||||| |||| || ||
Sbjct 1202966 TCCTTTGCTCAGCGCCTTGTTGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGAGCC 1203025
Query 46204 TTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAAC 46263
|||||| ||||||| | |||| | | || ||||||| |||||||| || ||||
Sbjct 1203026 TTTGCCTCCATCTTCTGGCTCAAGAAGAGAGGTCTCATGCCTGGCCTGACCTTCTCCAAC 1203085
Query 46264 GAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCT-CTACTATAACAC 46322
||||| || || || |||||||| ||||| || |||||||| || || || | || |
Sbjct 1203086 GAGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTTGCTTGCCTGCTCC----ACTC 1203141
Query 46323 TCGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGC------ATGTTCAAGGAGGC 46376
|| | || | || ||||| | || | | | | | || ||| || ||
Sbjct 1203142 TCACCTGAAGAACC-----GCGCCAG-CAAGGAGATTATCCGTGAAATCATCACTGATGC 1203195
Query 46377 GGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAA 46436
|| || ||| | || || || || | || || ||| ||| ||||||||||||||
Sbjct 1203196 CGTCAGAATCGAGCAAGAATTCTTGACCGAGGCTCTCCCCTGTGCTCTGCTGGGCATGAA 1203255
Query 46437 CGCACAGTCA-ATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTC 46495
||| || | ||| | ||||| |||||||| || || || |||||||| |||
Sbjct 1203256 CGC-CACCCTGATGAAGCAGTACATTGAGTTTGTTGCCGATCGTCTGCTCGTCGCTCTTG 1203314
Query 46496 ACCAGCCGAAGCATTTTCACGCGCGC-AATCCATTTGAGTTTATGAACAACATCTCCCTG 46554
| | |||| |||| || | | | || || ||||| || ||| | ||||||||||||
Sbjct 1203315 GCAACGAGAAG-ATTTACAAGTCCTCCAACCCCTTTGACTTCATGGAGAACATCTCCCTG 1203373
Query 46555 GAGGGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595
| ||||| || || || ||||| ||||| |||||||||||
Sbjct 1203374 GGCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGCGAGTA 1203414
>seq1
Length=7294945
Score = 131 bits (144), Expect = 2e-25
Identities = 908/1441 (63%), Gaps = 37/1441 (3%)
Strand=Plus/Minus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||| ||||| |||||||| || | ||||| ||| || | ||| || ||| ||||
Sbjct 1234089 TTGACAACCTGGAACTCGCCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGC 1234030
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || | || || ||||||||||| || | || | || ||||||||| || ||
Sbjct 1234029 TCGAAGCATTCATTGTTGCCCAGGATCTGGGAAGTGCTGGCAGTGGGCATGGGGGCGACG 1233970
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| || ||||| | ||||||| ||| || | ||||| |||| |||| |||||
Sbjct 1233969 AGCAAACTGTTGCGAATACCGTGCTCCTTAATCTGCTCCTTGAGCGAGTCCCACTCCCAC 1233910
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGG-GCT 145296
|| ||| ||| | || ||||||| ||| |||| | |||||| || |||||| | |
Sbjct 1233909 AGGTCAGTGGGCTTGACATCCCACAAGTCAAACTGGAGAATGCCTTCAGAGGCGGGTGAT 1233850
Query 145297 GCCTTGAAAGGAACT-GTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGAG 145355
||||||| | ||| ||| ||| | ||||| | ||| | ||||| || |
Sbjct 1233849 CCCTTGAATG--ACTCATAAGGACCCTCGATCTTGGCAATCTCCATAGATGCCTCGAGGG 1233792
Query 145356 CGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGC-----AGCATCGCTTCATCGCT 145410
| || || || ||||| |||||| |||| | | ||| ||| | ||
Sbjct 1233791 CAGCGTGGTAGATGGTCTCAAAGATTTGCTTGTTCAACTCGCGAGCTTCGGGTGAT---- 1233736
Query 145411 CTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGAT 145470
||| | || | ||||| | ||||| || || || ||||| | || || || ||
Sbjct 1233735 -TCGAAAGGAAGACGCAGAGCGAGGAAAGCGTCAGCAAGACCCTGAACACCAACACCAAT 1233677
Query 145471 GGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATA-TCGATTACGGTCGA 145529
||| || || |||| || | | ||| || | || || | | | || ||||
Sbjct 1233676 GGGTCGGTGGCGGCTGTTACTGTTGCGAGCCTCCTGAACGGGGTAGTAGTTCAC-ATCGA 1233618
Query 145530 TAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAA 145589
| || || | ||| || || || ||||| |||| | | | ||| | |||||||
Sbjct 1233617 TGATGCGGTTGAGGTTACGGACAACCACCTTGGTAACATCGTGAAGCTTCTTAAAGTCAT 1233558
Query 145590 ACCGAGCC-TCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACT 145648
| | |||| |||| | | | ||| || | || || | || ||||| || || ||
Sbjct 1233557 AGC-AGCCTTCGTTATAGTCGACAAAGGCAGGGAGAGCCAAAGAGGCCAAGTTGCAGACA 1233499
Query 145649 GCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATG 145708
|| ||| || | | | ||| | |||||||| | ||| | ||| | | ||||
Sbjct 1233498 GCGACCTCGTCAGGGGCAGAGTACTCAACGATCTCAGTGCAGAGGTTGGAGCTTCGGATG 1233439
Query 145709 GTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGT 145768
|||||||| || | ||| || || || | |||||| || |||||||| ||||| | ||
Sbjct 1233438 GTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAAAGCATAAAGGGG 1233379
Query 145769 CCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACGCACCTGC 145828
|||||||| ||| | ||| | ||| | || | ||| || || | |
Sbjct 1233378 TTACCAGTCTCAGTCTGGGCCTCTAGGATGGAGTACCACAGCTTCTGAGCTCGGA--TAG 1233321
Query 145829 TGCTGGTAGC--GGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGT 145886
| || | | |||||| | ||||| ||| || || |||| || | || |
Sbjct 1233320 TCTTGCGACCCTTGCCCTCCTTCTCGTACTTCTCATACAGAGCCTCGAATTCTTCGCCAT 1233261
Query 145887 AGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGT 145946
|||| || | ||||| || || | |||||| ||||||| | ||| | ||| |
Sbjct 1233260 AGCAGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATCAAAGTCCAGTCCAAGTTCTTCT 1233201
Query 145947 TGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGC 146006
|| |||| ||| |||| ||| || | ||| || ||| | || ||| || || |
Sbjct 1233200 CAACACGCTTCATGAACAGATCAGGGATCCAGAGAGCGAGGAACAGGTCACGGGCACGGA 1233141
Query 146007 AATCCTCAGCACCCATGTT-TCGCTTCAAATTAAGCACACT-ATAGATGTCCGCGTGCCA 146064
|| || || ||| | || | | ||| | ||| | ||| || ||||||||
Sbjct 1233140 CCTCTTCCTTGCCGTGGTTCTTGC-GGAGGTCAAGGA-ACTCAAAGACATCGGCGTGCCA 1233083
Query 146065 CGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACG 146121
|| || | |||| ||| | ||| || || |||||||||||||| |||| |
Sbjct 1233082 AGGCTCGAGGTAGATGGCAAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCGACGTATCT 1233023
Query 146122 TACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAGA 146181
| ||||||| ||||| || | |||||| || ||| ||| ||||| ||
Sbjct 1233022 GGCAGTGTTGTTGAAGACTCGAAGCATGGGGATGATACCGTTGGAGGTACCGTTGGTGCC 1232963
Query 146182 GTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCC-GCCGT 146240
| || | ||| | || | | || || |||| ||||| ||| || ||| |
Sbjct 1232962 GGCAATGTAAGAGCCCGTAGCACGGATACGGTGGACGTTCAGGCCGATACCACCAGCCAT 1232903
Query 146241 ACTTGGATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATCG--C 146297
|||||| || ||| || ||| || || |||||||| || |||||||| ||| |
Sbjct 1232902 -CTTGGAAATCATGGCACATGTC-TTTAGAGTGTCGTAGATACCCTCAATGCTGTCGTCC 1232845
Query 146298 TTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAACA 146357
||| ||| | | ||| ||||| ||| ||| ||| || || || || || ||| |
Sbjct 1232844 TTC--ATGTCCACCAGGAAGCATGAGGACAGCTGAGCTTGTGGGGTACCAGCGTTGAAGA 1232787
Query 146358 ACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCGATACGTTTCGATAGCGT 146417
|| || || || ||||| | ||| | | ||| | | || || || | |
Sbjct 1232786 GGGTGGGAGAGGCATGGGTAAAGAATTTGCTGGACATGAGGTGGTATGTCTCAAGGACAC 1232727
Query 146418 CTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCT 146477
| ||||| ||| || || ||| | ||| || ||||| | |||||| || || ||||
Sbjct 1232726 GCTCAATGTTGTCTCCCCAAACGCCAACAGCCACACGCATAATCATGTGCTGTGGTCGCT 1232667
Query 146478 C 146478
|
Sbjct 1232666 C 1232666
Score = 104 bits (114), Expect = 2e-17
Identities = 132/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| || |||||||| || || ||| || ||||| ||||||||||| ||| |||
Sbjct 2968755 CCTTCTGGATGTTGTAGTCAGACAGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCGAAGA 2968814
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| || |||||||| ||||| |||||||| || ||||| ||| || ||||| | |
Sbjct 2968815 TCAATCGCTGCTGATCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 2968874
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || |||| |||||||| || | ||| | ||| || || || || || || ||||
Sbjct 2968875 CGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 2968934
Query 131225 AA 131226
||
Sbjct 2968935 AA 2968936
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012664296320
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