Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03-
01] 23 sequences; 37,316,984 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq7 136 3e-27
>seq7
Length=2824016
Score = 136 bits (150), Expect = 3e-27
Identities = 206/293 (70%), Gaps = 0/293 (0%)
Strand=Plus/Minus
Query 6195 GACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAAC 6254
|| || |||||||||||||| ||| ||||||| ||||| | || || ||||| |||
Sbjct 1360433 GATGCCTTCTACCGCTACAAGATGGAGCGCATCCAGACCAAGATTGAAGGCAAGGGTAAC 1360374
Query 6255 GGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCC 6314
||||| || ||||| | |||||| || | ||||| || | || | |||||||
Sbjct 1360373 GGTATCAAGACCGTTGTCGTCAACTTGTCCAGCGTCGCCCAGTCTCTTGCTCGCCCTGGT 1360314
Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374
|||| | || || || || | ||| ||||| |||||||| | |||| | |||
Sbjct 1360313 TCCTATGTCATCAAGTACTTTGGTTTCGAGCTTGGTGCTCAGACCAACATTGACCCCAAG 1360254
Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434
|||| || | ||| | ||||| | || | ||||||||||||||||| |||||
Sbjct 1360253 GACGACCGTTGGATCATCAACGGCGCCCACGATGCTGCCAAGCTGCAGGACCATCTTGAT 1360194
Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487
||||| || ||| ||||| || || | ||||| | ||||| ||||||||
Sbjct 1360193 GGCTTCATCAACAAATTTGTCCTCTGCAAGAAATGCAAGAACCCTGAGACCGA 1360141
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334947106110113
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |