Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03- 01] 23 sequences; 37,316,984 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq7 136 3e-27 >seq7 Length=2824016 Score = 136 bits (150), Expect = 3e-27 Identities = 206/293 (70%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 6195 GACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAAC 6254 || || |||||||||||||| ||| ||||||| ||||| | || || ||||| ||| Sbjct 1360433 GATGCCTTCTACCGCTACAAGATGGAGCGCATCCAGACCAAGATTGAAGGCAAGGGTAAC 1360374 Query 6255 GGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCC 6314 ||||| || ||||| | |||||| || | ||||| || | || | ||||||| Sbjct 1360373 GGTATCAAGACCGTTGTCGTCAACTTGTCCAGCGTCGCCCAGTCTCTTGCTCGCCCTGGT 1360314 Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374 |||| | || || || || | ||| ||||| |||||||| | |||| | ||| Sbjct 1360313 TCCTATGTCATCAAGTACTTTGGTTTCGAGCTTGGTGCTCAGACCAACATTGACCCCAAG 1360254 Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434 |||| || | ||| | ||||| | || | ||||||||||||||||| ||||| Sbjct 1360253 GACGACCGTTGGATCATCAACGGCGCCCACGATGCTGCCAAGCTGCAGGACCATCTTGAT 1360194 Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 ||||| || ||| ||||| || || | ||||| | ||||| |||||||| Sbjct 1360193 GGCTTCATCAACAAATTTGTCCTCTGCAAGAAATGCAAGAACCCTGAGACCGA 1360141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334947106110113