Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03-
01] 23 sequences; 37,316,984 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq7 370 2e-97
seq1 343 3e-89
>seq7
Length=2824016
Score = 370 bits (410), Expect = 2e-97
Identities = 603/855 (71%), Gaps = 20/855 (2%)
Strand=Plus/Plus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||| ||||| || ||| |||||||||||| |||||||| |||
Sbjct 1202573 ATCTGGCAAATGTACAAAAAGGCCGAGGCTTCCTTCTGGACCGCCGAAGAGATTGATCTG 1202632
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA--GA--ACGAAAAGTTTTTCCTCAA 42415
||||||| | || |||| | || | |||| || |||| |||| ||| ||
Sbjct 1202633 TCCAAGGATCTGCACGACTGGAACA-ACCGCCTGAACGATGACGAGAAGTACTTCATCTC 1202691
Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475
|||| |||| ||||| || ||||| |||||||| ||||| |||||||||| | |
Sbjct 1202692 TCACATCTTGGCTTTCTTTGCTGCCTCCGACGGCATTGTCAACGAGAACCTGGTCGAGCG 1202751
Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535
|||| ||||| ||| | ||||| || ||||||||||| |||||||| ||
Sbjct 1202752 TTTCAGCGGCGAGGTTCAGATCCCCGAGGCTCGATGCTTCTACGGTTTCCAGATCATGAT 1202811
Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCC 42592
|||||| | ||||| ||| ||| || ||||||| |||| ||| || ||| |
Sbjct 1202812 GGAGAACATCCACTCCGAGACCTACTCC---CTGCTCATCGACACCTACGTCAAGGAGCA 1202868
Query 42593 CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGC 42652
| | |||| ||| || ||||| ||||| ||||| || || |||||| ||||||||
Sbjct 1202869 CAGCCAGCGCAACTACCTCTTCAACGCCATTGAGACCATTCCTTGCATCCGTAAGAAGGC 1202928
Query 42653 GGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGC 42712
|||||||| |||| |||||| || ||| | | || | || | || || ||
Sbjct 1202929 TGACTGGGCCATCAAGTGGATCCAGGACAAGGACTCTTCCTTTGCTCAGCGCCTTGTTGC 1202988
Query 42713 CTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAA 42772
|||| | ||||||||||| ||||||||| || ||||| ||||||||||||||||||||
Sbjct 1202989 CTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGAGCCTTTGCCTCCATCTTCTGGCTCAA 1203048
Query 42773 GCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831
| ||| |||| || ||||| || || |||||||| ||||| |||||| | |||||||
Sbjct 1203049 GAAGAGAGGTCTC-ATGCCTGGCCTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAGG 1203107
Query 42832 GGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGA 42891
| ||||| | |||||||| ||||| || ||| ||||| | | || || |
Sbjct 1203108 GTCTGCACACCGACTTTGCTTGCCTGCTCCACTC---TCACCTGAAGAACCGCGCCAGCA 1203164
Query 42892 AGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGC 42951
||||| |||| | |||||||| || ||||| |||||| | || ||| | ||
Sbjct 1203165 AGGAGATTATCCGTGAAATCATCACTGATGCCGTCAGAATCGAGCAAGAATTCTTGACCG 1203224
Query 42952 AGTCGCTGCCC-GTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAG 43010
|| | || ||| ||| | ||| | ||||||||| | ||| ||| ||||||| ||
Sbjct 1203225 AGGCTCTCCCCTGTG-CTCTGCTGGGCATGAACGCCACCCTGATGAAGCAGTACATTGAG 1203283
Query 43011 TACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTG 43069
| || ||||| | ||| || || | ||| || | | ||||| | |
Sbjct 1203284 TTTGTTGCCGATCGTCTGCTCGTCGCTCTTGGCAACGAGAAG-ATTTACAAGTCCTCCAA 1203342
Query 43070 CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCG 43129
|||||| ||||| |||||||||||||| ||| |||||||||||||| |||||||||||
Sbjct 1203343 CCCCTTTGACTTCATGGAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTCGAGAAGCG 1203402
Query 43130 CGTCGCCGACTACCA 43144
|||| ||| |||||
Sbjct 1203403 TGTCGGCGAGTACCA 1203417
>seq1
Length=7294945
Score = 343 bits (380), Expect = 3e-89
Identities = 1149/1767 (65%), Gaps = 67/1767 (4%)
Strand=Plus/Minus
Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800
||||||||| ||||| | || |||| ||| | ||||||||||||||| |||||||| |
Sbjct 1234427 TGAACTGGATAGGTGCAGCCGCAGCCTGGGTACGCAGGTAGTACATGCCAGTCTTGAGAC 1234368
Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860
|| |||| | || ||||||| || | ||| ||| | |||| |
Sbjct 1234367 CAAGCTTCCAGCCAGTGAAGTGCATGCTGGTAATCTTGCCCAT-------TGTGGGA--T 1234317
Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920
||| || || ||| | ||||||| ||| || | ||| | | || || || |
Sbjct 1234316 CCTT---CATGTGGATGTTCAAGGACTGGGACTGATCAATGAAAGCACCACGGTCGGCTG 1234260
Query 243921 CCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGT 243980
||| || || || |||||| ||||| | | |||||||| | || ||||| ||
Sbjct 1234259 ACATCTGGACGATGTGGCGCTGAGAGATCTCCCAAACAGTCTTGTACAGGGCCTTGATGT 1234200
Query 243981 GCTCGGGGAACCCTTCGA-TGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGC 244039
|||| || | || ||||||| | || || || | | |||| || | |
Sbjct 1234199 CGGCGGG-AATGTTGGGAATGTTCTGGATAGAACCGTTCTCAGCAATGATGCGGTTCTTC 1234141
Query 244040 ATGTTATCGTTCCACAGGCCCA-AGCGCTCCAGCGCCTCGA----CCAGGTGCCTGTTCA 244094
|| |||| ||| ||||| | || | || ||| || ||||| | || |
Sbjct 1234140 ATAGCATCGGACCAGAGGCCAGTATCGA-CAAGATCCTTGAGAAGCCAGGGG----TTGA 1234086
Query 244095 CCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGA 244154
| ||||| ||||| || | || || || |||||||||| |||| | || |||||||
Sbjct 1234085 CAACCTGGAACTCGCCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCGA 1234026
Query 244155 TGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCA 244214
|| || |||||||||| ||||| | ||||| ||||| |||||||| | || ||||
Sbjct 1234025 AGCATTCATTGTTGCCCAGGATCTGGGAAGTGCTGGCAGTGGGCATGGGGGCGACGAGCA 1233966
Query 244215 GACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGC 244274
|||||| | | |||||| || || | ||||| || ||| ||||||| |
Sbjct 1233965 AACTGTTGCGAATACCGTGCTCCTTAATCTGCTCCTTGAGCGAGTCCCACTCCCACAGGT 1233906
Query 244275 CCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGG 244334
| || || | |||| |||||| ||||||||| || | || | | || |
Sbjct 1233905 C--AGTGGGC-------TTGACATCCCACAAGTCAAACTGGAGAATGCCTT--CAGAGGC 1233857
Query 244335 GGCTG--CCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTCGT 244391
|| || |||| | | | | || ||||| ||| || ||| | || | || | | |
Sbjct 1233856 GGGTGATCCCTTGAATGACTCATAAGGACCCTCGATCTTGGCAATCTCCATAGATGCC-T 1233798
Query 244392 CGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGC 244451
||||||| |||| |||||||||||| ||||| |||||||| ||||| || | |
Sbjct 1233797 CGAGGGCAGCGTGGTAGATGGTCTCAAAGATTTGCTTGTTCAACTCGCGAGCTTCGGGTG 1233738
Query 244452 AGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGA 244511
| ||| || | | || | ||| |||| || || ||||| || || | || |
Sbjct 1233737 ATTCGAAAGGAAGACGCAGAGCGAGGAAAGCGTCAGCAAGACCCTGAACACCAACACCAA 1233678
Query 244512 TGGGTCTGTGTCGCTTGTT---GGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGT 244568
|||||| ||| || |||| | ||| || || | |||||||| |||| | |
Sbjct 1233677 TGGGTCGGTGGCGGCTGTTACTGTTGCGA---GCCTCCTGAACGGGGTAGTAGTTCACAT 1233621
Query 244569 CGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGT 244628
|||| | ||||||||| ||| | || | || ||| ||| || |||||
Sbjct 1233620 CGATGATGCGGTTGAGGTTACGGACAACCACCTTGGTAACATCGTGAAGCTTCTTAAAGT 1233561
Query 244629 CGTACTCGTAGGGATCCTCGGCGATGGTGATCCTC-ACAAACTCGTTGAGGGCGACGCTG 244687
| || | | ||| | || || || ||||| | ||| || | |
Sbjct 1233560 CATA-------GCAGCCT------TCGTTATAGTCGACAAAGGCAGGGAGAGCCAAAGAG 1233514
Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747
|||| ||||||||| || ||||| || | | | ||||| || ||||| |||||||||
Sbjct 1233513 GCCAAGTTGCAGACAGCGACCTCGTCAGGGGCAGAGTACTCAACGATCTCAGTGCAGAGG 1233454
Query 244748 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTG 244807
|| || |||||| ||||||| || || ||| |||| ||||||||| ||||||
Sbjct 1233453 TTGGAGCTTCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTG 1233394
Query 244808 TAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCC 244867
|| ||||| ||||| || ||||| |||||| | |||| | || ||| || | |
Sbjct 1233393 TAAAGCATAAAGGGGTTACCAGTCTCAGTCTGGGCCTCTAGGATGGAGTACCACAGCTTC 1233334
Query 244868 CTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCG 244927
||| || ||| ||||| |||||||||| |||||| ||||| ||||||
Sbjct 1233333 TGAGCTCGGATAGTCTTGCGACCCTTGCCCTCCTTCTCGTACTTCTCATACAGAGCCTCG 1233274
Query 244928 AACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAGACTCC 244985
|| || ||| || || | ||||| ||||| || | |||||||| | | |||
Sbjct 1233273 AATTCTTCGCCATAGCAGTCAGCAAGGCCAGGGCATTCGTTG--GGGCACATCAAAGTCC 1233216
Query 244986 ACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGA 245045
| || | | || || | || |||||| || || ||||||||||| || |||| |
Sbjct 1233215 AGTCCAAGTTCTTCTCAACACGCTTCATGAACAGATCAGGGATCCAGAGAGCGAGGAACA 1233156
Query 245046 GGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGA 245105
|||| | || | ||| ||| ||| |||||| | || || | || |||||||
Sbjct 1233155 GGTCACGGGCACGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAACTCAAAGA 1233096
Query 245106 CGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCT 245165
| ||| ||||||| ||||| | ||||| || | ||| || || ||||||||||| ||||
Sbjct 1233095 CATCGGCGTGCCAAGGCTCGAGGTAGATGGCAAAGGCACCAGGGCGCTTGTTGCCACCCT 1233036
Query 245166 GGTCCACCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAG 245224
|||| || || | || | |||||||| || || | || | || ||||| |||
Sbjct 1233035 GGTCGACGTATCTGGC-AGTGTTGTTGAAGACTCGAAGCATGGGGATGATACCGTTGGAG 1232977
Query 245225 TGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCT 245284
||||||||||| ||||| | |||| | | | || | || | || |||
Sbjct 1232976 GTACCGTTGGTGCCGGCAATGTAAGAGCCCGTAGCACGGATACGGTGGACGTTCAGGCCG 1232917
Query 245285 AGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCC 245344
| || || || |||||| || | ||| || |||| | ||||| || |||||
Sbjct 1232916 ATACCACCAGCCATCTTGGAAATCATGGCACATGTCTTTAGAGTGTCGTAGATACCCTCA 1232857
Query 245345 ATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTG-GGGCTGCA 245403
|||||||| |||||||| | ||| ||||| |||||||||| | ||||| ||| | |
Sbjct 1232856 ATGCTGTCGTCCTTCATGTCCACCAGGAAGCATGAGGACAGCT-GAGCTTGTGGGGTACC 1232798
Query 245404 CGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGT 245463
| |||||| || ||||| ||| ||||||||| | ||| || | || ||| ||
Sbjct 1232797 AGCGTTGAAGAGGGTGGGAGAGGCATGGGTAAAGAATTTGCTGGACATGAGGTGGTATGT 1232738
Query 245464 CTGGAGCAGAGCGTCGATGTTGTCGCC 245490
|| || | | || |||||||| ||
Sbjct 1232737 CTCAAGGACACGCTCAATGTTGTCTCC 1232711
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944338928502480
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