Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03- 01] 23 sequences; 37,316,984 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq6 105 7e-18 >seq6 Length=3085841 Score = 105 bits (116), Expect = 7e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || |||| || || || || || ||||||||||| | |||||| |||| Sbjct 760455 AAGGACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCGTC 760514 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||||||||||| || ||| | ||||| ||||||||||||||||| || || || || || Sbjct 760515 CTCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTC 760574 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| || || | ||||| | || || || | ||| | ||| Sbjct 760575 CTGGATCTTGGACTTGACGTTGTCAATGGTATCGGATGACTCGACCTCGAGAGTGATGGT 760634 Query 64411 CTTGCCGGTCAAAGTTTTTACGA 64433 ||||||||| | ||| || |||| Sbjct 760635 CTTGCCGGTGAGAGTCTTGACGA 760657 Score = 102 bits (112), Expect = 8e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || || |||||||| || | |||||| ||||||| |||||||| || || | Sbjct 760249 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCGTCTTCCAGCTGCTTACCAGCGAAG 760308 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 ||||| ||||||||||| || || || || || || || || || ||| ||| || Sbjct 760309 ATGAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTTGACTTGACGTTG 760368 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | |||||| | |||||||| | || | ||||||||||||||||| || || Sbjct 760369 TCGATGGTATCAGATGACTCCACTTCCAGTGTGATTGTCTTGCCGGTCAAAGTCTTGACA 760428 Query 64433 AAAATTTGCAT 64443 || || ||||| Sbjct 760429 AAGATCTGCAT 760439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644656352120