Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03-
01] 23 sequences; 37,316,984 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq1 282 4e-71
>seq1
Length=7294945
Score = 282 bits (312), Expect = 4e-71
Identities = 1082/1676 (65%), Gaps = 46/1676 (3%)
Strand=Plus/Plus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||| | |||||| || |||||| ||| || ||||| ||| | ||||||
Sbjct 1232597 AACTACCAATACTTCGGCTTCAAGACACTGGAGCGGTCATATCTCCTGAAGCTTGATGGC 1232656
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || |||||||| || || || | ||||| || || | || || || ||
Sbjct 1232657 AAGATTGTTGAGCGACCACAGCACATGATTATGCGTGTGGCTGTTGGCGTTTGGGGAGAC 1232716
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
|||| | ||| | | | | | |||| ||| | |||| |||
Sbjct 1232717 AACATTGAGCGTGTCCTTGAGACATACCACCTCATGTCCAGCAAATTCTTTACCCATGCC 1232776
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954
| || ||||| |||||||| || ||||| | ||| |||| || || |||||| ||
Sbjct 1232777 TCTCCCACCCTCTTCAACGCTGGTACCCCACAAGCTCAGCTGTCCTCATGCTTCCTGGTG 1232836
Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014
| |||| |||| ||| || || | ||||| || ||| ||||| | ||
Sbjct 1232837 GACATGAAGGACGACAGCATTGAGGGTATCTACGACACTCTAAAGACATGTGCCATGATT 1232896
Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCT 94072
|| || || || || ||||| | | |||||| |||| ||||| | ||| || |
Sbjct 1232897 TCCAAGATGGCTGGTGGTATCGGCCTGAACGTCCAC--CGTATCCGTGCTACGGGCTCTT 1232954
Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132
|||| ||| ||||| || ||||||||||| || |||| ||||| || ||||||||||
Sbjct 1232955 ACATTGCCGGCACCAACGGTACCTCCAACGGTATCATCCCCATGCTTCGAGTCTTCAACA 1233014
Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192
|| | || | ||||| ||||||||||| | | | ||| | || || |||| |
Sbjct 1233015 ACACTGCCAGATACGTCGACCAGGGTGGCAACAAGCGCCCTGGTGCCTTTGCCATCTACC 1233074
Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252
||||||| |||||||| || || | ||| | ||||| || |||||||||||||| |
Sbjct 1233075 TCGAGCCTTGGCACGCCGATGTCTTTGAGTTCCTTGACCTCCGCAAGAACCACGGCAAGG 1233134
Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312
| || | ||| | ||||| ||| |||||||||| | || || || || ||||| |
Sbjct 1233135 AAGAGGTCCGTGCCCGTGACCTGTTCCTCGCTCTCTGGATCCCTGATCTGTTCATGAAGC 1233194
Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372
| || ||||| |||| | ||||| | | | || ||||| ||||| || || || | |
Sbjct 1233195 GTGTTGAGAAGAACTTGGACTGGACTTTGATGTGCCCCAACGAATGCCCTGGCCTTGCTG 1233254
Query 94373 ACGTTTGTGGATCG-CGTTTTGAAGACT-TGTATGCTCGTTACGAATCGCAGGGCAAGGC 94430
|| | ||| || | || || || |||||| ||||| | |||||||||
Sbjct 1233255 ACTGCTATGG--CGAAGAATTCGAGGCTCTGTATGAGAAGTACGAGAAGGAGGGCAAGGG 1233312
Query 94431 CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGAC 94490
| ||| ||| ||| |||||||||| | ||| | || | ||| |||||
Sbjct 1233313 TCGCAAGACTATCCGAGCTCAGAAGCTGTGGTACTCCATCCTAGAGGCCCAGACTGAGAC 1233372
Query 94491 GGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCT 94550
|||| |||| || | | |||||| | |||| |||| ||||||| || ||||
Sbjct 1233373 TGGTAACCCCTTTATGCTTTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCT 1233432
Query 94551 CGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGA 94610
|| ||| ||||| || || ||||| ||||| || ||||| || | || |||||
Sbjct 1233433 GGGAACCATCCGAAGCTCCAACCTCTGCACTGAGATCGTTGAGTACTCTGCCCCTGACGA 1233492
Query 94611 GATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACAC 94670
| | ||||| || ||| ||| ||| | || | | || || ||| ||| |
Sbjct 1233493 GGTCGCTGTCTGCAACTTGGCCTCTTTGGCTCTCCCTGCCTTTGT-CGA-----CTATA- 1233545
Query 94671 GTCTACTGCTTCGTTCGATCTGGAGGAGCTT-GTGAACTTCGCGGGAAGGATGGTCTTGA 94729
| | ||| | | || | || ||||| || || | | || | ||| |
Sbjct 1233546 -ACGAAGGCTGC-TATGACTTTAAGAAGCTTCACGATGTTACCAAGGTGG-TTGTCCGTA 1233602
Query 94730 ACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACC 94789
|||| ||| | | ||||| ||||| ||||||||| | |||||| ||| |||
Sbjct 1233603 ACCTCAACCGCATCATCGATGTGAACTACTACCCCGTTCAGGAGGCTCGCAACAGTAACA 1233662
Query 94790 TGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGC 94849
|| || ||||| || | || || |||||| | || ||||| | | |||
Sbjct 1233663 GCCGCCACCGACCCATTGGTGTTGGTGTTCAGGGTCTTGCTGACGCTTTCCTCGCTCTGC 1233722
Query 94850 GTCTGCCCTACGACTCTGTCGACGC-GGCGGGTTTGAATTTGAACATATTCGAAAGCATT 94908
|||| || | ||| || ||| || ||| | ||||| | | || || || | |||
Sbjct 1233723 GTCTTCCTTTCGAATCACCCGAAGCTCGCGAG-TTGAACAAGCAAATCTTTGAGACCATC 1233781
Query 94909 TATTACGGGGCCATGAAACAATCCGTCCA-CTTGGCCAGATCGGACGGCGGGCCACACGA 94967
|| ||| ||| | | ||| | | ||| | |||| || || || | ||
Sbjct 1233782 TACCACGCTGCCCTCGAGGCATCTATGGAGATTGCCAAGAT----CGAGGGTCCTTATGA 1233837
Query 94968 ATCGTTCCGCGGATCGC---CCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGT 95024
|| ||| ||||| | ||| ||| |||||| | ||||| ||| | |||| |||
Sbjct 1233838 GTCATTCAAGGGATCACCCGCCTCTGAA---GGCATTCTCCAGTTTGACTTGTGGGATGT 1233894
Query 95025 GAAGCCCTCGGGTCTGTACGACTGGGA--AGCTCTACGCGCTGATGTTATCAAACACGGT 95082
|||||| | | |||| || ||||| |||| | | || || ||| | ||||||
Sbjct 1233895 CAAGCCCACTGACCTGTGGGAGTGGGACTCGCTCAAGGAGCAGA--TTAAGGAGCACGGT 1233952
Query 95083 GTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGC 95142
| ||| |||| || |||||||||||||| ||| ||| | |||||||| |||
Sbjct 1233953 ATTCGCAACAGTTTGCTCGTCGCCCCCATGCCCACTGCCAGCACTTCCCAGATCCTGGGC 1234012
Query 95143 AACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGG 95202
||||| || | ||||| |||| |||||||||| | ||| | | || || || || ||
Sbjct 1234013 AACAATGAATGCTTCGAGCCCTACACCTCCAACATCTACCAGCGACGTGTCCTTGCTGGC 1234072
Query 95203 GAATTCCCCGTCATCAACAAGCACCTCCT-ACGGGACCTGACGTCTCTGGGTGTGTGGGG 95261
|| |||| || ||||| || || | || | || || || || | |||
Sbjct 1234073 GAGTTCCAGGTTGTCAACCCCTGGCTTCTCAAGGATCTTGTCGATACT-GGCCTCTGGTC 1234131
Query 95262 TGACAAGGTCAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGC 95317
|| | ||||||| | |||| | ||||| || |||||||||| ||
Sbjct 1234132 CGATGCTATGAAGAACCGCATCATTGCT----GAGAACGGTTCTATCCAGAACATTCCCA 1234187
Query 95318 AAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373
| || || | ||||||||||| || |||||||| || ||||||||| | ||||||
Sbjct 1234188 ACATTCCCGCCGACATCAAGGCCCTGTACAAGACTGTTTGGGAGATCTCTCAGCGC 1234243
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494723057767080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |