Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03-
01] 23 sequences; 37,316,984 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq1 237 2e-57
seq7 138 1e-27
>seq1
Length=7294945
Score = 237 bits (262), Expect = 2e-57
Identities = 1167/1832 (64%), Gaps = 43/1832 (2%)
Strand=Plus/Minus
Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585
||||||| || ||| ||| |||| | || ||||||||||| || |||||||| |
Sbjct 1234427 TGAACTGGATAGGTGCAGCCGCAGCCTGGGTACGCAGGTAGTACATGCCAGTCTTGAGAC 1234368
Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 115645
| |||||||| || | ||||| || | |||| | ||| ||| | ||||
Sbjct 1234367 CAAGCTTCCAGCCAGTGAAGTGCATGCTGGTAATCTTGCCCATTGTGGGATCCTTCATGT 1234308
Query 115646 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 115705
|| ||||| ||||| ||||| ||||| || || || || | ||| | | |
Sbjct 1234307 GGATGTTCAAGGACTGGGACTGATCAATGAAAGCACCACGGTCGGCTGACATCTGGACGA 1234248
Query 115706 CATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATAT 115765
| | ||| ||||| ||||| |||| ||| ||| || || | || || |
Sbjct 1234247 TGTGGCGCTGAGAGATCTCCCAAACAGTCTTGTACAGGGCCTTGATGTCGGCGGGAATGT 1234188
Query 115766 CCACGATATTTTGGATAGAGCCAC---CTGCCTTGACCATGAGATCCTTCATATCCTTTG 115822
|| || |||||||| || | || ||| || | | ||||||| | | |
Sbjct 1234187 TGGGAATGTTCTGGATAGAACCGTTCTCAGCAATGA---TGCGGTTCTTCATAGCATCGG 1234131
Query 115823 ACCAGAGACCAATCTTCTTGAGATCCTCCA----CGAGGTGCTTATTGACAACAACAAAC 115878
||||||| ||| | | ||||||| | | ||| | |||||||| |||
Sbjct 1234130 ACCAGAGGCCAGTATCGACAAGATCCTTGAGAAGCCAGGGG----TTGACAACCTGGAAC 1234075
Query 115879 TCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTG 115938
|| || || ||| |||| | | |||||||||| ||||| ||||| ||||| ||||||
Sbjct 1234074 TCGCCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCATTCATTG 1234015
Query 115939 TTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGG 115998
|| |||| ||| |||| ||| ||| ||||||||||| || | ||| | ||||||||
Sbjct 1234014 TTGCCCAGGATCTGGGAAGTGCTGGCAGTGGGCATGGGGGCGACGAGCAAACTGTTGCGA 1233955
Query 115999 AGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGT--CGTAGTTGAGCTTTGTCT 116056
| ||| | || |||| | |||||||| | |||||| | | || | || | | ||
Sbjct 1233954 ATACCGTGCTCCTTAATCTGCTCCTTGAGCGAGTCCCACTCCCACAGGTCAG--TGGGCT 1233897
Query 116057 CCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCT 116116
| ||||||| ||||||||||| || |||| || || || ||||||| |||| ||
Sbjct 1233896 TGACATCCCACAAGTCAAACTGGAGAATGCCTTCAGAGGCGGGTGATCCCTTGAATGACT 1233837
Query 116117 CATATGGGCCCTCAACCTCCGCCA-ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATT 116175
|||| || ||||| | || || | | | || | ||||||||||| ||||| || ||
Sbjct 1233836 CATAAGGACCCTCGATCTTGGCAATCTCCATAGAT-GCCTCGAGGGCAGCGTGGTAGATG 1233778
Query 116176 GTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCAC 116235
|||||||| || | |||| | || ||| || || || | |||| |||
Sbjct 1233777 GTCTCAAAGATTTGCTTGTTCAACTCGCGAGCTTCGGGTGATTCGAAAGGAAGAC-GCAG 1233719
Query 116236 A-AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 116294
| | || | || || ||||| || ||||| | ||||| || || || | | ||
Sbjct 1233718 AGCGAGGAAAGCGTCAGCAAGACCCTGAACACCAACACCAATGGGTCGGTGGCGGCTGTT 1233659
Query 116295 AGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTT 116354
| || ||||| || ||||| || | ||| |||||| | | || || ||
Sbjct 1233658 ACTGTTGCGAGCCTCCTGAACGGGGTAGTAGTTCACATCGATGATGCGGTTGAGGTTACG 1233599
Query 116355 GGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATT 116414
| || ||||| || | || |||||||| | | ||| | | || | | |
Sbjct 1233598 GACAACCACCTTGGTAACATCGTGAAGCTTCTTAAAGTCATAGCAGCCTTCGTTATAGTC 1233539
Query 116415 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 116474
|||| | ||| || || | || |||| || || |||| | ||| || |||
Sbjct 1233538 GACAAAGGCAGGGAGAGCCAAAGAGGCCAAGTTGCAGACAGCGACCTCGTCAGGGGCAGA 1233479
Query 116475 GTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 116534
|||||| | || || || || | || || || ||||| |||| |||||| || ||
Sbjct 1233478 GTACTCAACGATCTCAGTGCAGAGGTTGGAGCTTCGGATGGTTCCCAGGTTCTTCTGGTT 1233419
Query 116535 TGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGA 116594
||| ||| || ||||||||||| |||||| | || | || ||||| || ||||
Sbjct 1233418 GCTCTTGCGGTTGCAGGCATCCTTGTAAAGCATAAAGGGGTTACCAGTCTCAGTCTGGGC 1233359
Query 116595 CTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAG--TGGCGTTGGCTCGCCCCTC 116651
|| || || | | ||| | | || | ||| | | || | ||| || | |||||
Sbjct 1233358 CTCTAGGATGGAGTACCACAGCTTCTG-AGCTCGGATAGTCTTGCG-ACCCTTG-CCCTC 1233302
Query 116652 CTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGAGAGCCCTG 116710
|| ||||||||| || || ||||| || ||||| ||| ||| || | || || |
Sbjct 1233301 CTTCTCGTACTTCTCATACAGAGCCTCGAATTCTTC-GCCATAGCAGTCAGCAAGGCCAG 1233243
Query 116711 GTGCCTT-ATCTGGACAGAAGAGAGACCATTGACCA--CCCTCCTCAACCCGCTTCATGA 116767
| || || | || || | | || ||| | ||| || |||||| ||||||||||
Sbjct 1233242 G-GCATTCGTTGGGGCACATCAAAGTCCA--GTCCAAGTTCTTCTCAACACGCTTCATGA 1233186
Query 116768 AGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCT 116827
| || || ||||||||||| || ||| || || || || | ||||| | || |
Sbjct 1233185 ACAGATCAGGGATCCAGAGAGCGAGGAACAGGTCACGGGCACGGACCTCTTCCTTGCCGT 1233126
Query 116828 GATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCG 116887
| || || | || | || || | || ||| |||||||| || || ||||| | |
Sbjct 1233125 GGTTCTTGCGGAGGTCAAGGAACTCAAAGACATCGGCGTGCCAAGGCTCGAGGTAGATGG 1233066
Query 116888 CGATTGACCCCTTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATA 116944
| | | || ||| ||| |||||| || || || || || ||| || |
Sbjct 1233065 CAAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGA 1233006
Query 116945 CGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGT 117004
| |||||||| || |||||||| | || || || || || ||| |||
Sbjct 1233005 CTCGAAGCATGGGGATGATACCGTTGGAGGTACCGTTGGTGCCGGCAATGTAAGAGCCCG 1232946
Query 117005 TGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGC 117064
| || | || | ||||| || || || ||||| || ||| ||| || || || |
Sbjct 1232945 TAGCACGGATACGGTGGACGTTCAGGCCGATACCACCAGCCATCTTGGAAATCATGGCAC 1232886
Query 117065 ACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGC 117124
| | | ||| || ||||||| || || || ||| |||| | | | |||||||
Sbjct 1232885 ATGTCTTTAGAGTGTCGTAGATACCCTCAATGCTGTCGTCCTTCATGTCCACCAGGAAGC 1232826
Query 117125 AGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGA 117184
| |||| || | ||| |||||||||||||||||||| || | || ||| | |
Sbjct 1232825 ATGAGGACAGCTGAGCTTGTGGGGTACCAGCGTTGAAGAGGGTGGGAGAGGCATGGGTAA 1232766
Query 117185 ACA--TACCTTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTG 117242
| | | || |||||| | ||| ||||| | |||| ||||| || ||
Sbjct 1232765 AGAATTTGCT--GGACATGAGGTGGTATGTCTCAAGGACACGCTCAATGTTGTCTCCCCA 1232708
Query 117243 AATACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAG 117302
|| || | | || ||||||| ||||| || ||| || | | | ||||| ||
Sbjct 1232707 AACGCCAACAGCCACACGCATAATCATGTGCTGTGGTCGCTCAACAATCTTGCCATCAAG 1232648
Query 117303 CCTCTGGAGGTAACTCTTCTCCAAGGTCTTGA 117334
| || |||| || | ||||| |||||||
Sbjct 1232647 CTTCAGGAGATATGACCGCTCCAGTGTCTTGA 1232616
>seq7
Length=2824016
Score = 138 bits (152), Expect = 1e-27
Identities = 349/522 (67%), Gaps = 9/522 (2%)
Strand=Plus/Minus
Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578
|||||| || ||| |||||||||||||| |||||||| || || |||||| ||| ||
Sbjct 1203127 AGCAAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGGCC 1203068
Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638
||||||||||| | |||||| | |||||| || | ||| | || |||||||||
Sbjct 1203067 AGGCATGAGACCTCTCTTCTTGAGCCAGAAGATGGAGGCAAAGGCTCCGCTGAAGAAGAT 1203008
Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAA 127697
||||| || || || |||| || |||| |||||||| | | | |||| | |
Sbjct 1203007 ACCCTCGACGGCAGCAAAGGCAACAAGGCGCTGAGCAAAGGA-AGAGTCCTTGTCCTGGA 1202949
Query 127698 ACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAA 127757
|||||| || ||||| | ||||| || ||| || || | ||||| || || | |
Sbjct 1202948 TCCACTTGATGGCCCAGTCAGCCTTCTTACGGATGCAAGGAATGGTCTCAATGGCGTTGA 1202889
Query 127758 AGAGTTCCTTCTTTTCTGATG-GATCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 127816
|||| | || | | || | || |||| ||| | || ||||| || || ||
Sbjct 1202888 AGAGGTAGTTGCGCT-GGCTGTGCTCCTTGACGTAGGTGTCGATGAGCAGGGAGTAGGTC 1202830
Query 127817 TCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTAT 127875
||| ||||| | | ||| || | ||| | ||||||| | || || ||| ||
Sbjct 1202829 TCGGAGTGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCATCGAGCCTCGGGGAT 1202771
Query 127876 CTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGC 127935
||| ||||| || ||| | | ||||| ||||| || ||||| ||||
Sbjct 1202770 CTGAACCTCGCCGCTGAAACGCTCGACCAGGTTCTCGTTGACAATGCCGTCGGAGGCAGC 1202711
Query 127936 AAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCA 127992
||| || |||| ||| | ||||| | || || | ||||||| || | |||||
Sbjct 1202710 AAAGAAAGCCAAGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCCA 1202651
Query 127993 GTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034
||||| |||||||| || ||||| | ||| || || |||||
Sbjct 1202650 GTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCA 1202609
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613507023616680
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