Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03- 01] 23 sequences; 37,316,984 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq7 235 9e-57 >seq7 Length=2824016 Score = 235 bits (260), Expect = 9e-57 Identities = 392/564 (70%), Gaps = 2/564 (0%) Strand=Plus/Minus Query 159917 AGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATG 159976 || ||||| ||||||||| |||||| |||||||| |||||||||| ||||||||| | | Sbjct 1203135 AGCAGGCAAGCAAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAG 1203076 Query 159977 ATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTA 160036 | ||||| ||||||| || | | |||||||| || |||| ||||| || ||||| Sbjct 1203075 GTCAGGCCAGGCATGAGACCTCTCTTCTTGAGCCAGAAGATGGAGGCAAAGGCTCCGCTG 1203016 Query 160037 AAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTG 160096 || ||||| ||||| ||||| ||||| || || || | || | |||| || | || || Sbjct 1203015 AAGAAGATACCCTCGACGGCAGCAAAGGCAACAAGGCGCTGAGCAAAGGAAGAGTCCTTG 1202956 Query 160097 TCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACG 160156 || ||| ||||| | ||||||| ||||||||||| |||||| || ||| ||| | | Sbjct 1202955 TCCTGGATCCACTTGATGGCCCAGTCAGCCTTCTTACGGATGCAAGGAATGGTCTCAATG 1202896 Query 160157 GCGTTAAACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAG 160216 ||||| || | || ||| | ||||||| || | || ||| ||| Sbjct 1202895 GCGTTGAAGAGGTAGTTGCGCTGGCTGTGCTCCTTGACGTAGGTGTCGATGAGCAGGGAG 1202836 Query 160217 TACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCC 160276 || | || | ||| | || || || ||||| || |||||| || ||||| Sbjct 1202835 TAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCG 1202776 Query 160277 AGATACTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCG 160336 | ||| ||||| |||| | | |||| || | || || | ||||||| | Sbjct 1202775 GGGATCTGAACCTCGCCGCTGAAACGCTCGACCAGGTTCTCGTTGACAATGCCGTCGGAG 1202716 Query 160337 GCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTT 160396 || |||||||||||||| | |||||||||||| | ||||||| | ||| || | || Sbjct 1202715 GCAGCAAAGAAAGCCAAGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTG 1202656 Query 160397 TCCCAGT-GTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTG 160455 | ||||| ||| || || | || || ||||| |||||| ||| |||| || ||||| Sbjct 1202655 TTCCAGTCGTG-CAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCAGAAGGAAGCCTC 1202597 Query 160456 AGCAGTTTTGTACATGGCCCAGAT 160479 || |||||||||| |||||| Sbjct 1202596 GGCCTTTTTGTACATTTGCCAGAT 1202573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154971392880