Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03-
01] 23 sequences; 37,316,984 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 6e-16
seq3 96.9 3e-14
>seq1
Length=7294945
Score = 102 bits (112), Expect = 6e-16
Identities = 108/141 (77%), Gaps = 1/141 (1%)
Strand=Plus/Plus
Query 366983 AAATAAAAATTGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTA 367042
|||| ||| |||||||||| || || ||||| |||||||| || ||||||| || || |
Sbjct 2339919 AAATTAAAGTTGTAGTAGCAACCATTGCATTCGGTATGGGAATCGATAAACCAGACGTCA 2339978
Query 367043 GAGTTGTTATTCATTATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTA 367102
|| ||||||| || |||| ||| |||| | ||||| ||||||||||||| |||
Sbjct 2339979 GATTTGTTATGCACCATGGCATTCCGAAGAGCTTAGAAGGCTATTATCAAGAAACTGGCC 2340038
Query 367103 GAGCAGGTCGTGATGGAGAAA 367123
| || || || ||||| ||||
Sbjct 2340039 GTGCGGGCCGAGATGG-GAAA 2340058
>seq3
Length=5619901
Score = 96.9 bits (106), Expect = 3e-14
Identities = 89/113 (79%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 671660 GAATTTTTCTTCCAAGTAATGGCAGGTCGTGAAGGTATTATTAATACGGCTATTAAAACT 671719
|||||||||||||| | ||||| |||||||||||| ||||| |||| ||| | || ||
Sbjct 2015964 GAATTTTTCTTCCACGCCATGGCCGGTCGTGAAGGTCTTATTGATACCGCTGTCAAGACA 2016023
Query 671720 GCTGATACTGGTTATATTCAAAGAAAACTTGTTAAAATGCTCGAAGATATCAA 671772
|| || |||||||| ||||| ||| || || ||| ||||||||| ||||
Sbjct 2016024 GCCGAGACTGGTTACATTCAGAGACGTCTCGTCAAAGCTCTCGAAGATCTCAA 2016076
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780821258664238
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |