Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03-
01] 23 sequences; 37,316,984 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq1 232 8e-56
seq7 96.9 4e-15
>seq1
Length=7294945
Score = 232 bits (256), Expect = 8e-56
Identities = 1026/1601 (64%), Gaps = 55/1601 (3%)
Strand=Plus/Minus
Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559
||||| ||||| |||||||| ||||| |||||| || || | ||| | || |||
Sbjct 1234303 GTTCAAGGACTGGGACTGATCAATGAAAGCACCACGGTCGGCTGACATCTGGACGATGTG 1234244
Query 109560 CTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCAC 109619
|| || ||||| ||||||||||||| |||||| || |||||||||
Sbjct 1234243 GCGCTGAGAGATCTCCCAAACAGTCTTGTACAGGGCCTTGATGTCGGCGGGAATGTTGGG 1234184
Query 109620 GATGTTTTGAATAGAGCCAC---CAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCA 109676
||||| || ||||| || |||| | | || | | |||||| | | |||||
Sbjct 1234183 AATGTTCTGGATAGAACCGTTCTCAGCAATGA---TGCGGTTCTTCATAGCATCGGACCA 1234127
Query 109677 GAGACCGACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGC 109736
||| || | ||||| | | ||| |||||| || || || |||||
Sbjct 1234126 GAGGCCAGTATCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGC 1234067
Query 109737 AAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAG 109796
||| ||||| |||||||||| | |||||||| ||||| || ||||||||||| ||
Sbjct 1234066 AAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCATTCATTGTTGCCCAG 1234007
Query 109797 GATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTT 109856
||| || | |||| || ||||||||||| || | ||| | |||||| || | ||| |
Sbjct 1234006 GATCTGGGAAGTGCTGGCAGTGGGCATGGGGGCGACGAGCAAACTGTTGCGAATACCGTG 1233947
Query 109857 CGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGT---CTC 109913
| ||| | | |||| | | |||||| || |||| | | ||| ||
Sbjct 1233946 CTCCTTAATCTGCTCCTTGAGCGAGTCCCACTC-------CCAC--AGGTCAGTGGGCTT 1233896
Query 109914 ACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTC 109973
||||||||| || || || | || |||| || || || |||||||| |||
Sbjct 1233895 GACATCCCACAAGTCAAACTGGAGAATGCCTTCAGAGGCGGGTGATCCCTTGAATGACTC 1233836
Query 109974 GTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGT 110033
|| | ||||| | || ||| | ||| || ||||| || || || || || || ||
Sbjct 1233835 ATAAGGACCCTCGATCTTGGCAATCTCCATAGATGCCTCGAGGGCAGCGTGGTAGATGGT 1233776
Query 110034 CTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGAC-CACAAA 110092
|||||| || || |||| ||||| || | ||||| ||||||| || |
Sbjct 1233775 CTCAAAGATTTGCTTGTTCAACTCGCGAGCTTCGGGTGATTCGAAAGGAAGACGCAGAGC 1233716
Query 110093 GAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAG 110152
|| ||| | || || |||||||||||||| | ||||||||| || || |||||
Sbjct 1233715 GAGGAAA-GCGTCAGCAAGACCCTGAACACCAACACCAATGGGTCGGTGGCGGCTGTTAC 1233657
Query 110153 AGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCG 110212
| ||||| | |||||||| |||| ||||||| || ||||| ||
Sbjct 1233656 TGTTGCGAGCCTCCTGAACGGGGTAGTAGTTCACATCGATGATGCGGTTGAGGTTACGGA 1233597
Query 110213 TCACAGTCTTCGTGATTTCATGGAGTTTGT---CGTAATCGAACGTTTTCGTCTCCTTAT 110269
|| ||| || | || || || || | || || | | | |||| | | |
Sbjct 1233596 CAACCACCTTGGTAACATCGTGAAGCTTCTTAAAGTCATAGCA-GCCTTCG--TTATAGT 1233540
Query 110270 TGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGG 110329
|||| | |||||||| | ||| || | ||||| |||| |||||| | | |
Sbjct 1233539 CGACAAAGGCAGGGAGAGCCAAAGAGGCCAAGTTGCAGACAGCGACCTCGTCAGGGGCAG 1233480
Query 110330 TGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGAT 110389
||| || | || || || || | |||||| || ||| |||| ||||||||| |
Sbjct 1233479 AGTACTCAACGATCTCAGTGCAGAGGTTGGAGCTTCGGATGGTTCCCAGGTTCTTCTGGT 1233420
Query 110390 TCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTG 110449
| ||| |||||| |||||||| || ||||| | ||| ||||||| || ||||| |
Sbjct 1233419 TGCTCTTGCGGTTGCAGGCATCCTTGTAAAGCATAAAGGGGTTACCAGTCTCAGTCTGGG 1233360
Query 110450 ACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAG--TTGCGTTAGCGAGACCTT 110506
|| || |||| | ||| | | || | || ||| || ||||| | | || |
Sbjct 1233359 CCTCTAGGATGGAGTACCACAGCTTCTG-AGCTCGGATAGTCTTGCG--ACCCTTGCCCT 1233303
Query 110507 CCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCT 110566
||| ||||||||| |||| |||| ||||| | || || |||| ||| ||
Sbjct 1233302 CCTTCTCGTACTTCTCATACAGAGCCTCGAATTCTTCGCCATAGCAGTCAGCAAG-GCCA 1233244
Query 110567 TCGCCTT-GTCGGGACAGAAGAGGGACCAATTTCCA--CCCTCCTCAACCCTCTTCATGA 110623
|| || || ||| || | | | ||| |||| || |||||| | ||||||||
Sbjct 1233243 GGGCATTCGTTGGGGCACATCAAAGTCCA--GTCCAAGTTCTTCTCAACACGCTTCATGA 1233186
Query 110624 ACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTT 110683
|||| ||||| ||||| | || ||| ||||||||| ||| ||||||| | || |
Sbjct 1233185 ACAGATCAGGGATCCAGAGAGCGAGGAACAGGTCACGGGCACGGACCTCTTCCTTGCCGT 1233126
Query 110684 GGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAG 110743
|||| ||| || || | || || | || ||| | |||||| || ||||| |||| |
Sbjct 1233125 GGTTCTTGCGGAGGTCAAGGAACTCAAAGACATCGGCGTGCCAAGGCTCGAGGTAGATGG 1233066
Query 110744 CGATGGATCCCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGA 110797
| | || || | | || || |||||| || || | || ||| ||||
Sbjct 1233065 CAAAGGCACC---AGGGCGCTTGTTGCCACCCTGGTCGACGTATCTGGCAGTGTTGTTGA 1233009
Query 110798 AGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACT 110857
|||| | ||||| || || || || | ||| ||| || || || ||| ||
Sbjct 1233008 AGACTCGAAGCATGGGGATGATACCGTTGGAGGTACCGTTGGTGCCGGCAATGTAAGAGC 1232949
Query 110858 TATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTG 110917
| ||||| || ||||| | || || |||||||| ||| ||| ||| |
Sbjct 1232948 CCGTAGCACGGATACGGTGGACGTTCAGGCCGATACCACCAGCCATCTTGGAAATCATGG 1232889
Query 110918 CACA-CTCTGT-GAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAG 110975
|||| ||| | |||||| | || ||||| ||||| || |||| || | | ||
Sbjct 1232888 CACATGTCTTTAGAGTGT--CGTAGATACCCTCAATGCTGTCGTCCTTCATGTCCACCAG 1232831
Query 110976 AAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATG 111035
||||| || |||| ||||| | || || || || |||||||| || || | |||||
Sbjct 1232830 GAAGCATGAGGACAGCTGAGCTTGTGGGGTACCAGCGTTGAAGAGGGTGGGAGAGGCATG 1232771
Query 111036 AATGAACAGACCTTG--GGACATCTTGTTGTATGTGTCGAG 111074
| | ||| ||| |||||| || |||||| || ||
Sbjct 1232770 --GGTAAAGAATTTGCTGGACATGAGGTGGTATGTCTCAAG 1232732
>seq7
Length=2824016
Score = 96.9 bits (106), Expect = 4e-15
Identities = 356/546 (65%), Gaps = 20/546 (4%)
Strand=Plus/Minus
Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567
|| || || || || |||||||||||||| || |||| || ||||||||||| |||
Sbjct 1203114 TGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGGCCAGGCATGAGACCT 1203055
Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627
|| ||||| ||||| ||||||| ||| ||| |||||||| ||||| ||
Sbjct 1203054 CTCTTCTTGAGCCAGAAGATGGAGGCAAAGGCTCCGCTGAAGAAGATACCCTCGACGGCA 1202995
Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GAACCACTTGAGAGC 119683
|| || || | || |||| ||| ||||| ||| |||||| || |||||||| ||
Sbjct 1202994 GCAAAGGCAACAAGGCGCTGAGC-AAAGGAAGAGTCCTTGTCCTGGATCCACTTGATGGC 1202936
Query 119684 CCAGTTGGC---CTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCTT 119740
||||| || |||||| ||||| || | || | ||||| | ||| || | ||
Sbjct 1202935 CCAGTCAGCCTTCTTACG---GATGCAAGGAATGGTCTCAATGGCGTTGAAGAGGTAGTT 1202879
Query 119741 --CTTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCACCATGA 119798
| | | | ||||| | || | || ||||| ||||||||||| ||
Sbjct 1202878 GCGCTGGCTGTGC--TCCTTGACGTAGGTGTCGATGAGCAGGGAGTAGGTCTCGGAGTGG 1202821
Query 119799 ACCAT-TTCATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAATTTGCACTTC 119857
| | | ||| || ||| | | || || | ||||| |||| || || || ||
Sbjct 1202820 ATGTTCTCCATCATG-ATCTGGAAACCGTAGAAGCATCGAGCCTCGGGGATCTGAACCTC 1202762
Query 119858 GTCAGCAAAATTGTTGTTGATATTTTCAAAAACAATTCCATCGGATCCAGCGAAGAATGC 119917
| | ||| | | | || || ||||| || ||||| |||| ||||| ||
Sbjct 1202761 GCCGCTGAAACGCTCGACCAGGTTCTCGTTGACAATGCCGTCGGAGGCAGCAAAGAAAGC 1202702
Query 119918 TAAGATGTACTTTATGAATTTCTGTTCATTATCGTTGAG--TGTT-TTCCAGTCGTCCAT 119974
||||||| ||||| | || || | |||||| || ||| |||||||||| ||
Sbjct 1202701 CAAGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCCAGTCGTGCAG 1202642
Query 119975 ATCTTTAGACAAGTCCACCTCTTCAGCTGTCCAGTTAGACATCTGTGCCTTTTTATAGAG 120034
||| || |||| || | |||||| || |||||| || || |||||||| || |
Sbjct 1202641 ATCCTTGGACAGATCAATCTCTTCGGCGGTCCAGAAGGAAGCCTCGGCCTTTTTGTACAT 1202582
Query 120035 TTCCCA 120040
|| |||
Sbjct 1202581 TTGCCA 1202576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975830669400
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