Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03- 01] 23 sequences; 37,316,984 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1 232 8e-56 seq7 96.9 4e-15 >seq1 Length=7294945 Score = 232 bits (256), Expect = 8e-56 Identities = 1026/1601 (64%), Gaps = 55/1601 (3%) Strand=Plus/Minus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559 ||||| ||||| |||||||| ||||| |||||| || || | ||| | || ||| Sbjct 1234303 GTTCAAGGACTGGGACTGATCAATGAAAGCACCACGGTCGGCTGACATCTGGACGATGTG 1234244 Query 109560 CTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCAC 109619 || || ||||| ||||||||||||| |||||| || ||||||||| Sbjct 1234243 GCGCTGAGAGATCTCCCAAACAGTCTTGTACAGGGCCTTGATGTCGGCGGGAATGTTGGG 1234184 Query 109620 GATGTTTTGAATAGAGCCAC---CAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCA 109676 ||||| || ||||| || |||| | | || | | |||||| | | ||||| Sbjct 1234183 AATGTTCTGGATAGAACCGTTCTCAGCAATGA---TGCGGTTCTTCATAGCATCGGACCA 1234127 Query 109677 GAGACCGACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGC 109736 ||| || | ||||| | | ||| |||||| || || || ||||| Sbjct 1234126 GAGGCCAGTATCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGC 1234067 Query 109737 AAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAG 109796 ||| ||||| |||||||||| | |||||||| ||||| || ||||||||||| || Sbjct 1234066 AAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCATTCATTGTTGCCCAG 1234007 Query 109797 GATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTT 109856 ||| || | |||| || ||||||||||| || | ||| | |||||| || | ||| | Sbjct 1234006 GATCTGGGAAGTGCTGGCAGTGGGCATGGGGGCGACGAGCAAACTGTTGCGAATACCGTG 1233947 Query 109857 CGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGT---CTC 109913 | ||| | | |||| | | |||||| || |||| | | ||| || Sbjct 1233946 CTCCTTAATCTGCTCCTTGAGCGAGTCCCACTC-------CCAC--AGGTCAGTGGGCTT 1233896 Query 109914 ACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTC 109973 ||||||||| || || || | || |||| || || || |||||||| ||| Sbjct 1233895 GACATCCCACAAGTCAAACTGGAGAATGCCTTCAGAGGCGGGTGATCCCTTGAATGACTC 1233836 Query 109974 GTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGT 110033 || | ||||| | || ||| | ||| || ||||| || || || || || || || Sbjct 1233835 ATAAGGACCCTCGATCTTGGCAATCTCCATAGATGCCTCGAGGGCAGCGTGGTAGATGGT 1233776 Query 110034 CTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGAC-CACAAA 110092 |||||| || || |||| ||||| || | ||||| ||||||| || | Sbjct 1233775 CTCAAAGATTTGCTTGTTCAACTCGCGAGCTTCGGGTGATTCGAAAGGAAGACGCAGAGC 1233716 Query 110093 GAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAG 110152 || ||| | || || |||||||||||||| | ||||||||| || || ||||| Sbjct 1233715 GAGGAAA-GCGTCAGCAAGACCCTGAACACCAACACCAATGGGTCGGTGGCGGCTGTTAC 1233657 Query 110153 AGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCG 110212 | ||||| | |||||||| |||| ||||||| || ||||| || Sbjct 1233656 TGTTGCGAGCCTCCTGAACGGGGTAGTAGTTCACATCGATGATGCGGTTGAGGTTACGGA 1233597 Query 110213 TCACAGTCTTCGTGATTTCATGGAGTTTGT---CGTAATCGAACGTTTTCGTCTCCTTAT 110269 || ||| || | || || || || | || || | | | |||| | | | Sbjct 1233596 CAACCACCTTGGTAACATCGTGAAGCTTCTTAAAGTCATAGCA-GCCTTCG--TTATAGT 1233540 Query 110270 TGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGG 110329 |||| | |||||||| | ||| || | ||||| |||| |||||| | | | Sbjct 1233539 CGACAAAGGCAGGGAGAGCCAAAGAGGCCAAGTTGCAGACAGCGACCTCGTCAGGGGCAG 1233480 Query 110330 TGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGAT 110389 ||| || | || || || || | |||||| || ||| |||| ||||||||| | Sbjct 1233479 AGTACTCAACGATCTCAGTGCAGAGGTTGGAGCTTCGGATGGTTCCCAGGTTCTTCTGGT 1233420 Query 110390 TCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTG 110449 | ||| |||||| |||||||| || ||||| | ||| ||||||| || ||||| | Sbjct 1233419 TGCTCTTGCGGTTGCAGGCATCCTTGTAAAGCATAAAGGGGTTACCAGTCTCAGTCTGGG 1233360 Query 110450 ACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAG--TTGCGTTAGCGAGACCTT 110506 || || |||| | ||| | | || | || ||| || ||||| | | || | Sbjct 1233359 CCTCTAGGATGGAGTACCACAGCTTCTG-AGCTCGGATAGTCTTGCG--ACCCTTGCCCT 1233303 Query 110507 CCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCT 110566 ||| ||||||||| |||| |||| ||||| | || || |||| ||| || Sbjct 1233302 CCTTCTCGTACTTCTCATACAGAGCCTCGAATTCTTCGCCATAGCAGTCAGCAAG-GCCA 1233244 Query 110567 TCGCCTT-GTCGGGACAGAAGAGGGACCAATTTCCA--CCCTCCTCAACCCTCTTCATGA 110623 || || || ||| || | | | ||| |||| || |||||| | |||||||| Sbjct 1233243 GGGCATTCGTTGGGGCACATCAAAGTCCA--GTCCAAGTTCTTCTCAACACGCTTCATGA 1233186 Query 110624 ACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTT 110683 |||| ||||| ||||| | || ||| ||||||||| ||| ||||||| | || | Sbjct 1233185 ACAGATCAGGGATCCAGAGAGCGAGGAACAGGTCACGGGCACGGACCTCTTCCTTGCCGT 1233126 Query 110684 GGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAG 110743 |||| ||| || || | || || | || ||| | |||||| || ||||| |||| | Sbjct 1233125 GGTTCTTGCGGAGGTCAAGGAACTCAAAGACATCGGCGTGCCAAGGCTCGAGGTAGATGG 1233066 Query 110744 CGATGGATCCCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGA 110797 | | || || | | || || |||||| || || | || ||| |||| Sbjct 1233065 CAAAGGCACC---AGGGCGCTTGTTGCCACCCTGGTCGACGTATCTGGCAGTGTTGTTGA 1233009 Query 110798 AGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACT 110857 |||| | ||||| || || || || | ||| ||| || || || ||| || Sbjct 1233008 AGACTCGAAGCATGGGGATGATACCGTTGGAGGTACCGTTGGTGCCGGCAATGTAAGAGC 1232949 Query 110858 TATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTG 110917 | ||||| || ||||| | || || |||||||| ||| ||| ||| | Sbjct 1232948 CCGTAGCACGGATACGGTGGACGTTCAGGCCGATACCACCAGCCATCTTGGAAATCATGG 1232889 Query 110918 CACA-CTCTGT-GAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAG 110975 |||| ||| | |||||| | || ||||| ||||| || |||| || | | || Sbjct 1232888 CACATGTCTTTAGAGTGT--CGTAGATACCCTCAATGCTGTCGTCCTTCATGTCCACCAG 1232831 Query 110976 AAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATG 111035 ||||| || |||| ||||| | || || || || |||||||| || || | ||||| Sbjct 1232830 GAAGCATGAGGACAGCTGAGCTTGTGGGGTACCAGCGTTGAAGAGGGTGGGAGAGGCATG 1232771 Query 111036 AATGAACAGACCTTG--GGACATCTTGTTGTATGTGTCGAG 111074 | | ||| ||| |||||| || |||||| || || Sbjct 1232770 --GGTAAAGAATTTGCTGGACATGAGGTGGTATGTCTCAAG 1232732 >seq7 Length=2824016 Score = 96.9 bits (106), Expect = 4e-15 Identities = 356/546 (65%), Gaps = 20/546 (4%) Strand=Plus/Minus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || || || || |||||||||||||| || |||| || ||||||||||| ||| Sbjct 1203114 TGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGGCCAGGCATGAGACCT 1203055 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 || ||||| ||||| ||||||| ||| ||| |||||||| ||||| || Sbjct 1203054 CTCTTCTTGAGCCAGAAGATGGAGGCAAAGGCTCCGCTGAAGAAGATACCCTCGACGGCA 1202995 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GAACCACTTGAGAGC 119683 || || || | || |||| ||| ||||| ||| |||||| || |||||||| || Sbjct 1202994 GCAAAGGCAACAAGGCGCTGAGC-AAAGGAAGAGTCCTTGTCCTGGATCCACTTGATGGC 1202936 Query 119684 CCAGTTGGC---CTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCTT 119740 ||||| || |||||| ||||| || | || | ||||| | ||| || | || Sbjct 1202935 CCAGTCAGCCTTCTTACG---GATGCAAGGAATGGTCTCAATGGCGTTGAAGAGGTAGTT 1202879 Query 119741 --CTTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCACCATGA 119798 | | | | ||||| | || | || ||||| ||||||||||| || Sbjct 1202878 GCGCTGGCTGTGC--TCCTTGACGTAGGTGTCGATGAGCAGGGAGTAGGTCTCGGAGTGG 1202821 Query 119799 ACCAT-TTCATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAATTTGCACTTC 119857 | | | ||| || ||| | | || || | ||||| |||| || || || || Sbjct 1202820 ATGTTCTCCATCATG-ATCTGGAAACCGTAGAAGCATCGAGCCTCGGGGATCTGAACCTC 1202762 Query 119858 GTCAGCAAAATTGTTGTTGATATTTTCAAAAACAATTCCATCGGATCCAGCGAAGAATGC 119917 | | ||| | | | || || ||||| || ||||| |||| ||||| || Sbjct 1202761 GCCGCTGAAACGCTCGACCAGGTTCTCGTTGACAATGCCGTCGGAGGCAGCAAAGAAAGC 1202702 Query 119918 TAAGATGTACTTTATGAATTTCTGTTCATTATCGTTGAG--TGTT-TTCCAGTCGTCCAT 119974 ||||||| ||||| | || || | |||||| || ||| |||||||||| || Sbjct 1202701 CAAGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCCAGTCGTGCAG 1202642 Query 119975 ATCTTTAGACAAGTCCACCTCTTCAGCTGTCCAGTTAGACATCTGTGCCTTTTTATAGAG 120034 ||| || |||| || | |||||| || |||||| || || |||||||| || | Sbjct 1202641 ATCCTTGGACAGATCAATCTCTTCGGCGGTCCAGAAGGAAGCCTCGGCCTTTTTGTACAT 1202582 Query 120035 TTCCCA 120040 || ||| Sbjct 1202581 TTGCCA 1202576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975830669400