Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03-
01] 23 sequences; 37,316,984 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq1 313 5e-80
seq7 201 2e-46
>seq1
Length=7294945
Score = 313 bits (346), Expect = 5e-80
Identities = 1145/1758 (65%), Gaps = 86/1758 (5%)
Strand=Plus/Minus
Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612
|| || ||||| | || |||| ||||||| ||| || || ||||||||||| |||||
Sbjct 1234431 ACTGTGAACTGGATAGGTGCAGCCGCAGCCTGGGTACGCAGGTAGTACATGCCAGTCTTG 1234372
Query 212613 AGGCC---CTTGCCCCAGCC-GTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATT 212668
|| || ||| |||||| ||| | |||||| |||| | | ||| | |||
Sbjct 1234371 AGACCAAGCTT---CCAGCCAGTGAA-GTGCAT-GCTGGTAAT--CTTGCCC-----ATT 1234324
Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728
||| ||||| || || | ||||| |||||| ||| || ||||| | |
Sbjct 1234323 GTGGG-ATCCTT------CATGTGGATGTTCAAGGACTGGGACTGATCAATGAAAGCACC 1234271
Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788
| ||| || | ||| | | ||| | | ||| |||| |||||| || |||||| | |
Sbjct 1234270 ACGGTCGGCTGACATCTGGACGATGTGGCGCTGAGAGATCTCCCAAACAGTCTTGTACAG 1234211
Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGT 212845
| |||| ||| | || | | ||| |||||||| | ||| || | | ||| |
Sbjct 1234210 GGCCTTGATGTCGGCGGGAATGTTGGGAATGTTCTGGATAGAACCGTTCTCAGCAATGAT 1234151
Query 212846 CAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTG 212905
| | | ||| | ||| ||||||||| | | || ||||| ||
Sbjct 1234150 GCGGTTCTT---CATAGCATCGGACCAGAGGCCAGTATCGACAAGATCCTTGAGAAGCCA 1234094
Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965
|||||||| | |||||| || || | || || | | |||||| | ||| || |||||
Sbjct 1234093 GGGGTTGACAACCTGGAACTCGCCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTA 1234034
Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025
|||||||| || || ||||| ||||| ||||| | ||||||||| ||||||||||| ||
Sbjct 1234033 GGGCTCGAAGCATTCATTGTTGCCCAGGATCTGGGAAGTGCTGGCAGTGGGCATGGGGGC 1233974
Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTC 213085
|| || | |||||| | | |||||||| || | | ||| ||||
Sbjct 1233973 GACGAGCAAACTGTTGCGAATACCGTGCTCCTTAATCTGCTCCTTGAGCG------AGTC 1233920
Query 213086 CCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTT 213145
||| || ||| |||||| | ||| || | ||||| ||||||||| | |||||||
Sbjct 1233919 CCA-CTCCCA--CAGGTCAGTGGGCTTGACATCCCACAAGTCAAACTGGAGAATGCCTT- 1233864
Query 213146 GCTCACGGGGCTG--CCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAG 213203
| | | || || |||| | | || || || || | |||||| | |||
Sbjct 1233863 -CAGAGGCGGGTGATCCCTTGAATGACTCATAAGGACCCTCGATCTTGGCAATCTCCATA 1233805
Query 213204 GACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCC 213263
|| |||| |||||||||| ||||||||| ||||| || | | |||| | || ||
Sbjct 1233804 GATGCCTCGAGGGCAGCGTGGTAGATGGTCTCAAAGATTTGCTTGTTCAACTCGCGAGCT 1233745
Query 213264 TCTGGGGACGTGAAGGGCATCATCAT-GCGTTGGAACACATCAGCCAGCCCCTGGACCCC 213322
|| || || ||| || | || ||| |||| | ||||| || ||||| || ||
Sbjct 1233744 TCGGGTGATTCGAAAGGAAGACGCAGAGCGA-GGAAAGCGTCAGCAAGACCCTGAACACC 1233686
Query 213323 GATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGT 213381
| || ||||||| ||| | |||| ||| |||| ||||| | |||||| |||
Sbjct 1233685 AACACCAATGGGTCGGTGGCGGCTGTTACTGTTGCGAGC-CTCCTGAACGGGGTAGTAGT 1233627
Query 213382 TGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACT 213441
| |||||||| ||||||||| ||| |||| ||||| |||| | || | ||
Sbjct 1233626 TCACATCGATGATGCGGTTGAGGTTACGGACAACCACCTTGGTAACATCGTGAAGCTTCT 1233567
Query 213442 CGTGATTGAACACGTAGCCCCCGTCCTGC------ACAAACTCAGGCAGGGCGATGCTGG 213495
| || | |||| || || | ||||| |||| || || | ||
Sbjct 1233566 ------TAAAGTCATAGCAGCCTTCGTTATAGTCGACAAAGGCAGGGAGAGCCAAAGAGG 1233513
Query 213496 CCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGT 213555
||| |||||| || || ||||| | || | | | |||||| | |||||| ||||| ||||
Sbjct 1233512 CCAAGTTGCAGACAGCGACCTCGTCAGGGGCAGAGTACTCAACGATCTCAGTGCAGAGGT 1233453
Query 213556 TGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA-ATCCTTG 213614
|| || ||||||||| |||||||||| ||||| ||| ||| | |||| |||||||
Sbjct 1233452 TGGAGCTTCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTT-GCGGTTGCAGGCATCCTTG 1233394
Query 213615 TAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTAC 213674
|| ||||| ||||| || ||||| ||||| | | || || | ||| || | |
Sbjct 1233393 TAAAGCATAAAGGGGTTACCAGTCTCAGTCTGGGCCTCTAGGATGGAGTACCACAGCTTC 1233334
Query 213675 CTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCG 213734
|| || | | | ||| | | | | |||||||| || || || |
Sbjct 1233333 -TGAGCTCGGATAGTCTTGCGACCCTTGCCCTCCTT--CTCGTACTTCTCATACAGAGCC 1233277
Query 213735 TTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGG--ATGCG---GGACACATGA 213789
| |||||| | ||| || | ||| || | || |||| || || || ||||| |
Sbjct 1233276 TCGAATTCTTCGCCATAG---CAGTC-AG-CAAGGCCAGGGCATTCGTTGGGGCACATCA 1233222
Query 213790 GGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCG 213848
|||||||| || | |||| || | || ||||||||| || |||| ||| || |||
Sbjct 1233221 AAGTCCAGTCCAAGTTCTTCTCA-ACACGCTTCATGAACAGATCAGGGATCCAGAGAGCG 1233163
Query 213849 GTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAG 213908
||||||||| | || | ||| ||| || ||| ||||| || || || ||
Sbjct 1233162 AGGAACAGGTCACGGGCACGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAAC 1233103
Query 213909 TCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTG 213965
||||||| || |||||||| ||||| | ||||||||||||||| || | || | |||
Sbjct 1233102 TCAAAGACATCGGCGTGCCAAGGCTCGAGGTAGATGGCAAAGGCACCAGGGCGCTTGTTG 1233043
Query 213966 CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCG 214025
|| |||||||| || ||||| ||||||||| || || | ||| | | |||
Sbjct 1233042 CCACCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACTCGAAGCATGGGGATGATACCG 1232983
Query 214026 TTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC---TCAGGTTGCTCATG 214082
||||| |||||||| || || || || ||||| | || | | ||| | | |
Sbjct 1232982 TTGGAGGTACCGTTGGTGCCGGCAATGTAAGAGCCCGTAGCACGGATACGGTGG---ACG 1232926
Query 214083 GAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATG 214142
|| || || ||||| || |||||| |||||||| || | | | ||| || |
Sbjct 1232925 TTCAGGCCGATACCACCAGCCATCTTGGAAATCATGGCACATGTCTTTAGAGTGTCGTAG 1232866
Query 214143 ATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG 214202
|| || | |||||||| || | | || || || |||||| || |||| | || ||
Sbjct 1232865 ATACCCTCAATGCTGTCGTCCTTCATGTCCACCAGGAAGCATGAGGACAGCT-GAGCTTG 1232807
Query 214203 -GACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAG 214261
| | |||| |||||| || ||||| ||||||| | | || ||| | || | |||
Sbjct 1232806 TGGGGTACCAGCGTTGAAGAGGGTGGGAGAGGCATGGGTAAAGAATTTGCTGGACATGAG 1232747
Query 214262 CCTGTAGGTCTCCAGGAC 214279
||| ||||| |||||
Sbjct 1232746 GTGGTATGTCTCAAGGAC 1232729
>seq7
Length=2824016
Score = 201 bits (222), Expect = 2e-46
Identities = 564/850 (66%), Gaps = 28/850 (3%)
Strand=Plus/Minus
Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899
||||| || || || | ||||| |||||||| ||||| || ||| ||||||||||||
Sbjct 1203417 TGGTACTCGCCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTCC 1203358
Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCC-AGCAG 47958
|||||| |||||||||| | || || | | | || ||| | | |||||
Sbjct 1203357 ATGAAGTCAAAGGGGTTGGAGGACTTGTAAATCT-TCTCGTTGCCAAGAGCGACGAGCAG 1203299
Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018
|||| || || |||| ||||| | ||| |||||| ||||||||| | || |
Sbjct 1203298 ACGATCGGCAACAAACTCAATGTACTGCTTCATCAGGGTGGCGTTCATGCCCAGCAGAG- 1203240
Query 48019 CAC-GGGCAAAGCCTTTGTGAGAAACTCCTTCTCTAT-CTGCACGGCTTCCCCCACAATC 48076
||| ||| | ||||| || | || || | ||| || ||| ||||| || | ||
Sbjct 1203239 CACAGGGGAGAGCCTCGGTCAAGAATTCTTGCTCGATTCTG-ACGGCATCAGTGATGAT- 1203182
Query 48077 TGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTG------GCATAGAGCATG 48130
|| ||| | | ||| || | |||| ||| ||| | | ||||| |
Sbjct 1203181 ---TTCACG-GATAATCTCC---TTGCTGGCGC-GGTTCTTCAGGTGAGAGTGGAGCAGG 1203130
Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190
|| |||||||| |||||| || ||||| || ||||||| ||||||||||| ||
Sbjct 1203129 CAAGCAAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGG 1203070
Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250
|||||||||| || |||| ||||||||||| || | || || | || |||||||
Sbjct 1203069 CCAGGCATGAGACCTCTCTTCTTGAGCCAGAAGATGGAGGCAAAGGCTCCGCTGAAGAAG 1203010
Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310
|| ||||| || || || || || || | || | || |||| || |||||| |
Sbjct 1203009 ATACCCTCGACGGCAGCAAAGGCAACAAGGCGCTGAGCAAAGGAAGAGTCCTTGTCCTGG 1202950
Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG 48370
||||| | |||||||| |||||||| |||||| || || ||||| ||||| |
Sbjct 1202949 ATCCACTTGATGGCCCAGTCAGCCTTCTTACGGATGCAAGGAATGGTCTCAATGGCGTTG 1202890
Query 48371 AAGAGCTTCTTGCACTCAC-CTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACAT 48429
||||| | |||| || | ||| ||| || ||||| || ||| | ||| |
Sbjct 1202889 AAGAGGTAGTTGCGCTGGCTGTGC-TCCTTGACGTAGGTGTCGATGAGCAGGGAGTAGGT 1202831
Query 48430 CTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACAC 48489
||| ||||| | ||||| || ||||||||| ||||||||| | ||||| |
Sbjct 1202830 CTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCGGGGAT 1202771
Query 48490 CTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGC 48549
||| || || | ||| | ||| | ||| ||||| ||||| || || || || |||||
Sbjct 1202770 CTGAACCTCGCCGCTGAAACGCTCGACCAGGTTCTCGTTGACAATGCCGTCGGAGGCAGC 1202711
Query 48550 AAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC----ATTCC 48605
|||||| || | || || | ||| | ||||| | | | || || ||||
Sbjct 1202710 AAAGAAAGCCAAGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAG-GCGGTTGTTCC 1202652
Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665
|| | || | || ||| ||| || | ||||| | ||||||||||| || || |
Sbjct 1202651 AGTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCAGAAGGAAGCCTCGGCCT 1202592
Query 48666 TTTTGTACAT 48675
||||||||||
Sbjct 1202591 TTTTGTACAT 1202582
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931532532184320
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