Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03-
01] 23 sequences; 37,316,984 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq1 260 2e-64
seq7 104 3e-17
>seq1
Length=7294945
Score = 260 bits (288), Expect = 2e-64
Identities = 978/1502 (65%), Gaps = 45/1502 (3%)
Strand=Plus/Plus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|||||| ||||| | ||||| || || | ||| | || || ||||||| ||||
Sbjct 1232672 CCACAGCACATGATTATGCGTGTGGCTGTTGGCGTTTGGGGAGACAACATTGAGCGTGTC 1232731
Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTA--TGTTCATTCACGCAACACCAACCCTCT 75329
| ||||||||| || |||||| || | | || | || || | || |||||||
Sbjct 1232732 CTTGAGACATACCACCTCATGTCC--AGCAAATTCTTTACCCATGCCTCTCCCACCCTCT 1232789
Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389
|||| |||||||| ||| | | ||| ||||| |||||||| | | || ||||| |
Sbjct 1232790 TCAACGCTGGTACCCCACAAGCTCAGCTGTCCTCATGCTTCCTGGTGGACATGAAGGACG 1232849
Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449
|| || | |||||||| | ||||| | | ||||| || || ||| |||||
Sbjct 1232850 ACAGCATTGAGGGTATCTACGACACTCTAAAGACATGTGCCATGATTTCCAAGATGGCTG 1232909
Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509
| ||||| || || || |||| | | | || | ||| ||| || || |
Sbjct 1232910 GTGGTATCGGCCTGAACGTCCACCGTATCCGTGCTACGGGCTCTTACATTGCCGGCACCA 1232969
Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569
| ||| || | ||||| || || |||||||| || || ||| ||| || | || |
Sbjct 1232970 ACGGTACCTCCAACGGTATCATCCCCATGCTTCGAGTCTTCAACAACACTGCCAGATACG 1233029
Query 75570 TAAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCAT 75625
| | || | | ||| | || || || | || ||||| | || || |||||
Sbjct 1233030 TCGACCAGG-GTGGCAACAAGCGCCCTGGTGCCTTTGCCATCTACCTCGAGCCTTGGCAC 1233088
Query 75626 GCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGT 75685
|||||| || | ||||||||||| | || ||||| || | ||||||| || |||
Sbjct 1233089 GCCGATGTCTTTGAGTTCCTTGACCTCCGCAAGAACCACGGCAAGGAAGAGG-TCCGTGC 1233147
Query 75686 A-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744
| || || || | || ||||| || || || ||||||||||| |||||| ||
Sbjct 1233148 CCGTGACCTGTTCCTCGCTCTCTGGATCCCTGATCTGTTCATGAAGCGTGTTGAGAAGAA 1233207
Query 75745 --TGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGAC-GCGGTGG 75800
||| | ||| || | | || || || || || || || || | ||| || |||
Sbjct 1233208 CTTGGAC--TGGACTTTGATGTGCCCCAACGAATGC-CCTGGCCTTGCTGACTGCTATGG 1233264
Query 75801 GTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC---CAATGCGA 75857
|| || || || || || || ||||| || ||||||| | | ||| ||
Sbjct 1233265 C-GAAGAATTCGAGGCTCTGTATGAGAAGTACGAGAAGGAGGGCAAGGGTCGCAA---GA 1233320
Query 75858 CTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACA 75916
|| | | ||| | || | | ||| | | || || | | ||||| |||||||| |
Sbjct 1233321 CTATCCGAGCT-CAGAAGCTGTGGTACTCCATCCTAGAGGCCCAGACTGAGACTGGTAAC 1233379
Query 75917 CCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACA 75976
|| | |||||||||||||||||| || ||| ||||| ||||| ||||| |||||||
Sbjct 1233380 CCCTTTATGCTTTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAACC 1233439
Query 75977 ATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCT 76036
||| ||||| || || ||||| || || | |||||| | | || ||| |||
Sbjct 1233440 ATCCGAAGCTCCAACCTCTGCACTGAGATCGTTGAGTACTCTGCCCCTGACGAGGTCGCT 1233499
Query 76037 GTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAA---TGAAGA-GACTCGCAC 76092
|| ||||| ||||| || | || || || | |||| | | | || | || ||
Sbjct 1233500 GTCTGCAACTTGGCCTCTTTGGCTCTCCCTGCCTTTGTCGACTATAACGAAGGCT-GC-- 1233556
Query 76093 TTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGT 76152
| ||| | | | || ||||| || | || ||| | ||| | || || ||||| |
Sbjct 1233557 -TATGACTTTAAGAAGCTTCACGATGTTACCAAGGTGGTTGTCCGTAACCTCAACCGCAT 1233615
Query 76153 CATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACC 76212
||| || || | || |||||| || || || || ||| | || ||| ||||
Sbjct 1233616 CATCGATGTGAACTACTACCCCGTTCAGGAGGCTCGCAACAGTAACAGCCGCCACCGACC 1233675
Query 76213 TATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTT-TGTGCCGCTACGCATTTG 76271
|||||| | |||||||| ||||| || || | || | | ||| || | | || |
Sbjct 1233676 CATTGGTGTTGGTGTTCAGGGTCTTGCTGACGCTTTCCTCGCTCTGCGTCTTC-CTTTCG 1233734
Query 76272 ATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCC 76331
| ||| ||||| ||| |||| | |||||||| ||||| || ||||| |||
Sbjct 1233735 AATCACCCGAAGCTCGCGAGTTGAACAAGCAAATCTTTGAGACCATCTACCACGCTGCCC 1233794
Query 76332 TGGAGGCGAGTTGTGA-ATTGGCTGAAGCCCAAGGTTCCT-ATGAGACATTTGAGGGTTC 76389
| ||||| | || |||| | ||| | ||| |||| ||||| |||| |||| ||
Sbjct 1233795 TCGAGGCATCTATGGAGATTGCC--AAGATCGAGGGTCCTTATGAGTCATTCAAGGGATC 1233852
Query 76390 TCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTA 76449
||||| || |||| | || |||||||| ||||||| | | || || | || | ||
Sbjct 1233853 ACCCGCCTCTGAAGGCATTCTCCAGTTTGACTTGTGGGATG-TCAAGCCCA-CTGACCTG 1233910
Query 76450 CG--ACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTG 76507
| | ||||| |||||||| | || |||||| | ||| |||| |||||| | |
Sbjct 1233911 TGGGAGTGGGACTCGCTCAAGGAGCAGATTAAGGAGCACGGTATTCGCAACAGTTTGCTC 1233970
Query 76508 ATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 76567
| || || ||||| || ||| ||| | || ||| |||| || ||||||||||| ||
Sbjct 1233971 GTCGCCCCCATGCCCACTGCCAGCACTTCCCAGATCCTGGGCAACAATGAATGCTTCGAG 1234030
Query 76568 CCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAAC 76627
|| ||||| | |||||||||| | || | ||| || || ||||| ||||||||
Sbjct 1234031 CCCTACACCTCCAACATCTACCAGCGACGTGTCCTTGCTGGCGAGTTCCAGGTTGTCAAC 1234090
Query 76628 AAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTC 76687
|| |||| || || | | ||| ||||||||| | | ||||||| | | |
Sbjct 1234091 CCCTGGCTTCTCAAGGATCTTGTCGATACTGGCCTCTGGTCCGATGCTATGAAGAACCGC 1234150
Query 76688 AT 76689
||
Sbjct 1234151 AT 1234152
>seq7
Length=2824016
Score = 104 bits (114), Expect = 3e-17
Identities = 343/522 (66%), Gaps = 11/522 (2%)
Strand=Plus/Plus
Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACCC---TGAAT 64770
||||| || ||||| ||||| ||||||| ||||| |||||||||| | || ||||
Sbjct 1202609 TGGACCGCCGAAGAGATTGATCTGTCCAAGGATCTGCACGACTGGAACAACCGCCTGAAC 1202668
Query 64771 GAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 64830
|| | || ||| | ||||| ||||| |||| |||||||||| ||||| || |||
Sbjct 1202669 GATGACGAGAAGTACTTCATCTCTCACATCTTGGCTTTCTTTGCTGCCTCCGACGGCATT 1202728
Query 64831 GTTTTTGAGAATATCAATAACAATTTT-GCGGATGAAGTGCAGATAAGCGAAGCGCGCTC 64889
|| ||||| | | ||| |||| || || ||||| ||| || || |
Sbjct 1202729 GTCAACGAGAACCTGGTCGAGCGTTTCAGCGGC-GAGGTTCAGATCCCCGAGGCTCGATG 1202787
Query 64890 ATTCTACGCATATCAATGCCATAATGAA-ATGGTTCATGGCGAAACATATTCAAAATTGA 64948
||||||| | || | ||| ||| | | | || ||| || || || | |
Sbjct 1202788 CTTCTACGGTT-TCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCA 1202846
Query 64949 TTGACAAATACATTAAGGATGGATCTGAAAAGAAGC-AGTTATTTGAAGCCATCCAAACT 65007
| |||| ||| | ||||| | | | | | | | | || | ||||| | ||
Sbjct 1202847 TCGACACCTACGTCAAGGA-GCACAGCCAGCGCAACTACCTCTTCAACGCCATTGAGACC 1202905
Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCG 65066
| || || || |||||||| | ||||| || || ||| | | |||| | |||
Sbjct 1202906 ATTCCTTGCATCCGTAAGAAGGCTGACTGGGCCATCAAGTGGATCCAGGACAAGGACTCT 1202965
Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126
||||| || |||||||| |||| ||||| || ||||||||||||||| ||| |
Sbjct 1202966 -TCCTTTGCTCAGCGCCTTGTTGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGAGC 1203024
Query 65127 ATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186
|| | | || | ||| | |||||| | ||||||||||| ||||| |||||| ||
Sbjct 1203025 CTTTGCCTCCATCTTCTGGCTCAAGAAGAGAGGTCTCATGCCTGGCCTGACCTTCTCCAA 1203084
Query 65187 TGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228
|| || || || || || |||||||| ||| || |||||
Sbjct 1203085 CGAGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTTGC 1203126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569428486240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |