Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03-
01] 23 sequences; 37,316,984 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq7 84.2 3e-11
>seq7
Length=2824016
Score = 84.2 bits (92), Expect = 3e-11
Identities = 185/277 (67%), Gaps = 3/277 (1%)
Strand=Plus/Minus
Query 18431 TAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAA 18490
|| |||||||| | || || || | || || || ||| | ||||| ||||| |||
Sbjct 1202856 TAGGTGTCGATGAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAA 1202797
Query 18491 CTATAAAACGATCTAGCCTCGGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTC 18550
| || || ||| ||||||||| |||| ||||| || | || |||| |||
Sbjct 1202796 CCGTAGAAGCATCGAGCCTCGGGGATCTGAACCTCGCCGCTGAAACGCTCGACCAGGTTC 1202737
Query 18551 TCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTT 18610
|| || || || ||||| | | || || || ||||| | | ||||| | ||
Sbjct 1202736 TCGTTGACAATGCCGTCGGAGGCAGCAAAGAAAGCCAAGATGTGAGAGATGAAGTACTTC 1202677
Query 18611 TCATTATCCTTGAGA---TTGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCC 18667
|| | ||| || || |||||||| || | | ||| || || ||||||| |||||
Sbjct 1202676 TCGTCATCGTTCAGGCGGTTGTTCCAGTCGTGCAGATCCTTGGACAGATCAATCTCTTCG 1202617
Query 18668 GATGTCCAAAAAGATGATTCGGCCTGTTTGTACATTT 18704
| ||||| || || | ||||||| |||||||||||
Sbjct 1202616 GCGGTCCAGAAGGAAGCCTCGGCCTTTTTGTACATTT 1202580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731871789586800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |