Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03- 01] 23 sequences; 37,316,984 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq7 84.2 3e-11 >seq7 Length=2824016 Score = 84.2 bits (92), Expect = 3e-11 Identities = 185/277 (67%), Gaps = 3/277 (1%) Strand=Plus/Minus Query 18431 TAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAA 18490 || |||||||| | || || || | || || || ||| | ||||| ||||| ||| Sbjct 1202856 TAGGTGTCGATGAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAA 1202797 Query 18491 CTATAAAACGATCTAGCCTCGGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTC 18550 | || || ||| ||||||||| |||| ||||| || | || |||| ||| Sbjct 1202796 CCGTAGAAGCATCGAGCCTCGGGGATCTGAACCTCGCCGCTGAAACGCTCGACCAGGTTC 1202737 Query 18551 TCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTT 18610 || || || || ||||| | | || || || ||||| | | ||||| | || Sbjct 1202736 TCGTTGACAATGCCGTCGGAGGCAGCAAAGAAAGCCAAGATGTGAGAGATGAAGTACTTC 1202677 Query 18611 TCATTATCCTTGAGA---TTGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCC 18667 || | ||| || || |||||||| || | | ||| || || ||||||| ||||| Sbjct 1202676 TCGTCATCGTTCAGGCGGTTGTTCCAGTCGTGCAGATCCTTGGACAGATCAATCTCTTCG 1202617 Query 18668 GATGTCCAAAAAGATGATTCGGCCTGTTTGTACATTT 18704 | ||||| || || | ||||||| ||||||||||| Sbjct 1202616 GCGGTCCAGAAGGAAGCCTCGGCCTTTTTGTACATTT 1202580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731871789586800