Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03- 01] 23 sequences; 37,316,984 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 3e-13 >seq1 Length=7294945 Score = 91.5 bits (100), Expect = 3e-13 Identities = 255/385 (66%), Gaps = 10/385 (3%) Strand=Plus/Plus Query 110701 GAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCAT 110757 ||||||||||| ||||||| | ||| || | || ||||| ||| | ||| | | Sbjct 1233003 GAGTCTTCAACAACACTGCCAGATACGTCGACCAGGGTGGCAACAAGCGCCCTGGTGCCT 1233062 Query 110758 TTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAA 110817 |||| ||||| ||||| |||||||| | ||| | ||||| ||| | || || || || | Sbjct 1233063 TTGCCATCTACCTCGAGCCTTGGCACGCCGATGTCTTTGAGTTCCTTGACCTCCGCAAGA 1233122 Query 110818 ATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATT 110877 | || || ||||| | || ||||| | || || | ||||| | ||| Sbjct 1233123 ACCACGGCAAGGAAGAGGTCCGTGCCCGTGACCTGTTCCTCGCTCTCTGGATCCCTGATC 1233182 Query 110878 TATTCATGAAACGTGTT--CAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCG-TT 110934 | |||||||| |||||| ||||| ||| ||| || | ||||| || || || | Sbjct 1233183 TGTTCATGAAGCGTGTTGAGAAGAACTTGG--ACTGGACTTTGATGTG-CCCCAACGAAT 1233239 Query 110935 CTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAA 110994 ||||| || |||| ||||| |||| || || | || || || || || || | Sbjct 1233240 GCCCTGGCCTTGCTGACTGCTATGGCGAAGAATTCGAGGCTCTGTATGAGAAGTACGAGA 1233299 Query 110995 AAGAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAAT 111054 | || |||||| |||||| || | |||||| | || |||| | ||||| || Sbjct 1233300 AGGAGGGCAAGGGTCGCAAGACTATCCGAGCTCAGAAGCTGTGGTACTCCATCCTAGAGG 1233359 Query 111055 CACAAGTTGAAACTGG-AACTCCTT 111078 | || ||| ||||| ||| |||| Sbjct 1233360 CCCAGACTGAGACTGGTAACCCCTT 1233384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812450261103