Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03-
01] 23 sequences; 37,316,984 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq3 116 4e-21
>seq3
Length=5619901
Score = 116 bits (128), Expect = 4e-21
Identities = 197/277 (71%), Gaps = 10/277 (4%)
Strand=Plus/Plus
Query 147231 CAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCC-GCAGTCCACGTACCTGGCCCCAA 147289
||||||||| ||||||| ||| |||||| ||| ||| || || || || ||||
Sbjct 1519826 CAGCTGGTCGACGCCCTTGCCGGCGTAGTCTGTTTGAGCA-TCGACATAGTCTGCGCCAA 1519884
Query 147290 AGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGC 147349
|||||| ||||||||||||||| || || |||||||||||| | | ||| | | |||
Sbjct 1519885 AGTGCCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACGTCGCGGTGGGTG-AGC 1519943
Query 147350 CCG-CCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCC--CTTGG 147406
||| | | | ||| |||||| |||| |||| | |||||||||| || || | | |
Sbjct 1519944 CCGACGCTGTCGAGGAACTCGCGGGAGCCGTTGCCGTCCCAGATCTTGACGCCCACGTCG 1520003
Query 147407 CGGAGAGCTCCTTA-GAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACC 147465
| ||| || | | ||| ||| |||| |||||||||||| ||||| | | ||
Sbjct 1520004 CTGAGGGCGGCGGACGAG---GTGTTGCCCTCGATGAACCAGAGGAGCTCGGCGATGACG 1520060
Query 147466 CCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGA 147502
| | ||||| | ||||||||| ||||||||||
Sbjct 1520061 GCGCGGAGGAAGACTCGCTTGGTGGTGAGCAGGGGGA 1520097
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583487832247200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |