Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03- 01] 23 sequences; 37,316,984 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq6 98.7 8e-16 >seq6 Length=3085841 Score = 98.7 bits (108), Expect = 8e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || ||||||||||||| | |||| ||||||| ||||| ||||| ||| | Sbjct 760249 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCGTCTTCCAGCTGCTTACCAGCGAAG 760308 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 ||||| ||||| || || || || | |||||| || || ||||| || | | | Sbjct 760309 ATGAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTTGACTTGACGTTG 760368 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | || || | | || ||||| || || || | ||||| |||| ||| || ||| Sbjct 760369 TCGATGGTATCAGATGACTCCACTTCCAGTGTGATTGTCTTGCCGGTCAAAGTCTTGACA 760428 Query 27237 AAGATTTGCATA 27248 ||||| |||||| Sbjct 760429 AAGATCTGCATA 760440 Score = 86.0 bits (94), Expect = 5e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || || || ||||| ||||||| | |||| |||| || ||||| ||||| Sbjct 760471 GTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCGTCCTCAAGCTGCTTACCA 760530 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | ||||||||||| || || || || | |||||| || || ||||||| || Sbjct 760531 GCAAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTGGACTTG 760590 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | || || | | || || || ||||| || | ||||| || ||||| Sbjct 760591 ACGTTGTCAATGGTATCGGATGACTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGAGTC 760650 Query 27231 TTCAC 27235 || || Sbjct 760651 TTGAC 760655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934280885576