Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03- 01] 23 sequences; 37,316,984 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq7 141 3e-28 >seq7 Length=2824016 Score = 141 bits (156), Expect = 3e-28 Identities = 366/544 (67%), Gaps = 19/544 (3%) Strand=Plus/Plus Query 443337 TTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTA 443396 || |||||| || ||||||||||| |||||||| || ||| |||||| | || || Sbjct 1202606 TTCTGGACCGCCGAAGAGATTGATCTGTCCAAGGATCTGCACGACTGGAACAACCGCCTG 1202665 Query 443397 TCTAGCCATGAACGCGATTT-CTTCAAATG---CATCTTGGCCTTCTTTGCACCGAGCGA 443452 | | |||| || || | ||||| | ||||||||| |||||||| | ||| Sbjct 1202666 ---AACGATGA-CGAGAAGTACTTCATCTCTCACATCTTGGCTTTCTTTGCTGCCTCCGA 1202721 Query 443453 CGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGC 443512 ||| || ||| ||||| ||||| ||||||| || ||| | | ||||||| Sbjct 1202722 CGGCATTGTCAACGAGAACCTGGTCGAGCGTTTCAGCGGCGAGGTTCAGATCCCCGAGGC 1202781 Query 443513 CCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCA 443572 || | |||||||| ||||| | ||||||||||| ||| ||||| |||| | Sbjct 1202782 TCGATGCTTCTACGGTTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCT 1202841 Query 443573 GTTGATCAAGACACTAATTCCGAACGAAGACGAACAGCGGTCCATCTTCT-CATCGTTCA 443631 | | ||| | || ||| || || || || ||||| | | ||| || || || Sbjct 1202842 GCTCATCGACAC-CTACGTC--AAGGAGCACAGCCAGCGCAACTACCTCTTCAACGC-CA 1202897 Query 443632 T---GACCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAACGAG 443688 | ||||| || ||||| | | ||| || |||||| | ||||| || | || Sbjct 1202898 TTGAGACCATTCCTTGCATCCGTAAGAAGGCTGACTGGGCCATCAAGTGGATCCAG-GAC 1202956 Query 443689 AAAATCTCAGC-TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTT 443747 || ||| | || | |||| || || || ||||||| ||||| || | || || Sbjct 1202957 AAGGACTCTTCCTTTGCTCAGCGCCTTGTTGCCTTTGCTGCCGTCGAGGGTATCTTCTTC 1203016 Query 443748 AGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGAC 443807 ||||| ||| || ||||||||||||||| | || ||| | || || |||| || ||||| Sbjct 1203017 AGCGG-AGCCTTTGCCTCCATCTTCTGGCTCAAGAAGAGAGGTCTCATGCCTGGCCTGAC 1203075 Query 443808 CTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867 ||| ||||| || ||| ||| ||||||||| |||| |||||| || || || || Sbjct 1203076 CTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTTGCTTGCCTGCT 1203135 Query 443868 CTAC 443871 | || Sbjct 1203136 CCAC 1203139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588335531937235