Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03-
01] 23 sequences; 37,316,984 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq7 141 3e-28
>seq7
Length=2824016
Score = 141 bits (156), Expect = 3e-28
Identities = 366/544 (67%), Gaps = 19/544 (3%)
Strand=Plus/Plus
Query 443337 TTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTA 443396
|| |||||| || ||||||||||| |||||||| || ||| |||||| | || ||
Sbjct 1202606 TTCTGGACCGCCGAAGAGATTGATCTGTCCAAGGATCTGCACGACTGGAACAACCGCCTG 1202665
Query 443397 TCTAGCCATGAACGCGATTT-CTTCAAATG---CATCTTGGCCTTCTTTGCACCGAGCGA 443452
| | |||| || || | ||||| | ||||||||| |||||||| | |||
Sbjct 1202666 ---AACGATGA-CGAGAAGTACTTCATCTCTCACATCTTGGCTTTCTTTGCTGCCTCCGA 1202721
Query 443453 CGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGC 443512
||| || ||| ||||| ||||| ||||||| || ||| | | |||||||
Sbjct 1202722 CGGCATTGTCAACGAGAACCTGGTCGAGCGTTTCAGCGGCGAGGTTCAGATCCCCGAGGC 1202781
Query 443513 CCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCA 443572
|| | |||||||| ||||| | ||||||||||| ||| ||||| |||| |
Sbjct 1202782 TCGATGCTTCTACGGTTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCT 1202841
Query 443573 GTTGATCAAGACACTAATTCCGAACGAAGACGAACAGCGGTCCATCTTCT-CATCGTTCA 443631
| | ||| | || ||| || || || || ||||| | | ||| || || ||
Sbjct 1202842 GCTCATCGACAC-CTACGTC--AAGGAGCACAGCCAGCGCAACTACCTCTTCAACGC-CA 1202897
Query 443632 T---GACCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAACGAG 443688
| ||||| || ||||| | | ||| || |||||| | ||||| || | ||
Sbjct 1202898 TTGAGACCATTCCTTGCATCCGTAAGAAGGCTGACTGGGCCATCAAGTGGATCCAG-GAC 1202956
Query 443689 AAAATCTCAGC-TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTT 443747
|| ||| | || | |||| || || || ||||||| ||||| || | || ||
Sbjct 1202957 AAGGACTCTTCCTTTGCTCAGCGCCTTGTTGCCTTTGCTGCCGTCGAGGGTATCTTCTTC 1203016
Query 443748 AGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGAC 443807
||||| ||| || ||||||||||||||| | || ||| | || || |||| || |||||
Sbjct 1203017 AGCGG-AGCCTTTGCCTCCATCTTCTGGCTCAAGAAGAGAGGTCTCATGCCTGGCCTGAC 1203075
Query 443808 CTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867
||| ||||| || ||| ||| ||||||||| |||| |||||| || || || ||
Sbjct 1203076 CTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTTGCTTGCCTGCT 1203135
Query 443868 CTAC 443871
| ||
Sbjct 1203136 CCAC 1203139
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588335531937235
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |