Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03- 01] 23 sequences; 37,316,984 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq6 93.3 3e-14 >seq6 Length=3085841 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| || || ||||||||||| || ||||| || || || || || ||||||| Sbjct 760231 ACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCGTCTTCC 760290 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || || ||||| || || || | ||||| ||||| || || | ||||||||||| || Sbjct 760291 AGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTC-CTG 760349 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 | |||| || ||| | || || || ||||||||||| || || || || Sbjct 760350 AATCTTTGACTTGACGTTGTCGATGGTATCAGATGACTCCACTTCCAGTGTGATTGTCTT 760409 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || || ||||| |||||||| Sbjct 760410 GCCGGTCAAAGTCTTGACAAAGATCTGCAT 760439 Score = 89.7 bits (98), Expect = 3e-13 Identities = 155/223 (70%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 || |||| |||| ||||| ||| |||||| || ||||| || || || || || Sbjct 1398496 AGGCGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGG 1398437 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || ||||| ||||| || || ||||| |||||||| || | |||||| Sbjct 1398436 CCATCCTCGAGCTGCTTACCAGCAAAGATCAATCGCTGCTGGTCCGGGGGAATGCCCTCC 1398377 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| || | || ||| | || ||||| |||||| || | ||| Sbjct 1398376 TTGTCCTGGATC-TTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGT 1398318 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 ||||| || || || | || || || ||||||||||| ||| Sbjct 1398317 GATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTTG 1398275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729511777359