Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03-
01] 23 sequences; 37,316,984 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq1 145 1e-29
>seq1
Length=7294945
Score = 145 bits (160), Expect = 1e-29
Identities = 437/672 (65%), Gaps = 2/672 (0%)
Strand=Plus/Minus
Query 76550 CCAGGACATTCATTCGGACACATCAATGACCACTC-ACCATCTTCCTTAACCCGTTTCAT 76608
||||| ||||| || || |||||||| | ||| || | ||||| | ||| || |||||
Sbjct 1233246 CCAGGGCATTCGTTGGGGCACATCAAAGTCCAGTCCAAGTTCTTC-TCAACACGCTTCAT 1233188
Query 76609 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCC 76668
|| |||||||| ||||| ||||| | || || || |||| | ||||| || ||
Sbjct 1233187 GAACAGATCAGGGATCCAGAGAGCGAGGAACAGGTCACGGGCACGGACCTCTTCCTTGCC 1233128
Query 76669 TGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 76728
||||| || || |||||||| | | ||| | ||||| || || || || ||
Sbjct 1233127 GTGGTTCTTGCGGAGGTCAAGGAACTCAAAGACATCGGCGTGCCAAGGCTCGAGGTAGAT 1233068
Query 76729 CGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATA 76788
|| | |||| || || || || || ||||| || | |||||||||||||| || |
Sbjct 1233067 GGCAAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCGACGTATCTGGCAGTGTTGTTGAA 1233008
Query 76789 AACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCC 76848
|||| | ||| || || || ||||| || ||||| || || || | ||| ||| ||
Sbjct 1233007 GACTCGAAGCATGGGGATGATACCGTTGGAGGTACCGTTGGTGCCGGCAATGTAAGAGCC 1232948
Query 76849 ACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGC 76908
||||| ||| | ||||| || || || ||||| || || || | ||
Sbjct 1232947 CGTAGCACGGATACGGTGGACGTTCAGGCCGATACCACCAGCCATCTTGGAAATCATGGC 1232888
Query 76909 ACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAA 76968
||| || | ||||| ||||| ||||| || || || ||| |||||| | || ||
Sbjct 1232887 ACATGTCTTTAGAGTGTCGTAGATACCCTCAATGCTGTCGTCCTTCATGTCCACCAGGAA 1232828
Query 76969 ACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGT 77028
|| |||| ||| || || || || || || | || ||||| ||||| ||
Sbjct 1232827 GCATGAGGACAGCTGAGCTTGTGGGGTACCAGCGTTGAAGAGGGTGGGAGAGGCATGGGT 1232768
Query 77029 GAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATG 77088
|| |||| || | || | |||||| |||| || || || | |
Sbjct 1232767 AAAGAATTTGCTGGACATGAGGTGGTATGTCTCAAGGACACGCTCAATGTTGTCTCCCCA 1232708
Query 77089 AATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTAT 77148
|| || ||||| |||||||| | ||| ||||| ||||| || ||| |||| || |
Sbjct 1232707 AACGCCAACAGCCACACGCATAATCATGTGCTGTGGTCGCTCAACAATCTTGCCATCAAG 1232648
Query 77149 TTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCT 77208
|||| | ||||| |||| || || || || || || | ||| |||||||
Sbjct 1232647 CTTCAGGAGATATGACCGCTCCAGTGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCG 1232588
Query 77209 TTCGTAAATAAT 77220
||||| | |||
Sbjct 1232587 GTCGTAGACAAT 1232576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712934195031360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |