Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03- 01] 23 sequences; 37,316,984 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1 145 1e-29 >seq1 Length=7294945 Score = 145 bits (160), Expect = 1e-29 Identities = 437/672 (65%), Gaps = 2/672 (0%) Strand=Plus/Minus Query 76550 CCAGGACATTCATTCGGACACATCAATGACCACTC-ACCATCTTCCTTAACCCGTTTCAT 76608 ||||| ||||| || || |||||||| | ||| || | ||||| | ||| || ||||| Sbjct 1233246 CCAGGGCATTCGTTGGGGCACATCAAAGTCCAGTCCAAGTTCTTC-TCAACACGCTTCAT 1233188 Query 76609 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCC 76668 || |||||||| ||||| ||||| | || || || |||| | ||||| || || Sbjct 1233187 GAACAGATCAGGGATCCAGAGAGCGAGGAACAGGTCACGGGCACGGACCTCTTCCTTGCC 1233128 Query 76669 TGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 76728 ||||| || || |||||||| | | ||| | ||||| || || || || || Sbjct 1233127 GTGGTTCTTGCGGAGGTCAAGGAACTCAAAGACATCGGCGTGCCAAGGCTCGAGGTAGAT 1233068 Query 76729 CGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATA 76788 || | |||| || || || || || ||||| || | |||||||||||||| || | Sbjct 1233067 GGCAAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCGACGTATCTGGCAGTGTTGTTGAA 1233008 Query 76789 AACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCC 76848 |||| | ||| || || || ||||| || ||||| || || || | ||| ||| || Sbjct 1233007 GACTCGAAGCATGGGGATGATACCGTTGGAGGTACCGTTGGTGCCGGCAATGTAAGAGCC 1232948 Query 76849 ACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGC 76908 ||||| ||| | ||||| || || || ||||| || || || | || Sbjct 1232947 CGTAGCACGGATACGGTGGACGTTCAGGCCGATACCACCAGCCATCTTGGAAATCATGGC 1232888 Query 76909 ACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAA 76968 ||| || | ||||| ||||| ||||| || || || ||| |||||| | || || Sbjct 1232887 ACATGTCTTTAGAGTGTCGTAGATACCCTCAATGCTGTCGTCCTTCATGTCCACCAGGAA 1232828 Query 76969 ACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGT 77028 || |||| ||| || || || || || || | || ||||| ||||| || Sbjct 1232827 GCATGAGGACAGCTGAGCTTGTGGGGTACCAGCGTTGAAGAGGGTGGGAGAGGCATGGGT 1232768 Query 77029 GAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATG 77088 || |||| || | || | |||||| |||| || || || | | Sbjct 1232767 AAAGAATTTGCTGGACATGAGGTGGTATGTCTCAAGGACACGCTCAATGTTGTCTCCCCA 1232708 Query 77089 AATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTAT 77148 || || ||||| |||||||| | ||| ||||| ||||| || ||| |||| || | Sbjct 1232707 AACGCCAACAGCCACACGCATAATCATGTGCTGTGGTCGCTCAACAATCTTGCCATCAAG 1232648 Query 77149 TTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCT 77208 |||| | ||||| |||| || || || || || || | ||| ||||||| Sbjct 1232647 CTTCAGGAGATATGACCGCTCCAGTGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCG 1232588 Query 77209 TTCGTAAATAAT 77220 ||||| | ||| Sbjct 1232587 GTCGTAGACAAT 1232576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934195031360