Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20gamsii_20[genbank_20GCA_5F001481775.1_202015-12-23] 381 sequences; 37,970,415 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq3 118 2e-21 >seq3 Length=984773 Score = 118 bits (130), Expect = 2e-21 Identities = 317/474 (67%), Gaps = 8/474 (2%) Strand=Plus/Plus Query 230170 TCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCG-GGAG 230228 || |||||| |||||||||| |||| | ||||| ||||| || | ||| | |||| Sbjct 414944 TCCTTTGCCCAGCGTCTCGTTGCCTTTGCTGCCGTTGAGGGTAT-CT-TCTTCAGCGGAG 415001 Query 230229 TTTCTGCG-CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTA 230287 | ||| ||||||| ||||| ||| | |||| | ||||||||||| | || | Sbjct 415002 CCTTTGCCTCCATCTTCTGGCTCAAGAAGAGAGGTCTCATGCCTGGCCTGACCTTCTCCA 415061 Query 230288 ACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTA-TGTATTCA 230346 ||||| | ||| ||| || |||||||| || || | | || || | | | || Sbjct 415062 ACGAGCTAATCTCTCGTGATGAGGGTCTGCA-CACCGACTTTGCTTGCCTGCTCCACTCT 415120 Query 230347 AAGCTCCAGAACAA-GCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGA 230405 | || ||||| || | || |||| || | ||||| || || || || Sbjct 415121 CACCTGAAGAACCGCGCCAGCAAG-GAGATTATCCGTGAGATCATCACTGATGCCGTCAG 415179 Query 230406 AAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGA 230465 || ||| |||||||| | || ||| | || ||| || | ||||||||||| Sbjct 415180 AATCGAGCAGGAGTTCTTGACCGAGGCTCTCCCCTGTGCTCTGCTGGGCATGAACGCCAC 415239 Query 230466 ACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGA 230525 || ||| |||||||| || || || ||||| || | | || || || || |||| Sbjct 415240 GCTGATGAAGCAGTACATTGAGTTTGTCGCCGATCGTCTGCTCGTCGCTCTCGGCAACGA 415299 Query 230526 GAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAA 230585 ||| | ||||| || |||||||| | || |||||| ||| || || || || Sbjct 415300 GAAGATCTACAAGTCCTCCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGCGGCAA 415359 Query 230586 GACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATGAA 230639 ||||||||||||||| ||||| || | || ||||||| | ||||||| ||||| Sbjct 415360 GACCAACTTCTTCGAGAAGCGCGTTGGCGAGTATCAGAAGGCTGGTGTCATGAA 415413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057818836166030