Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20gamsii_20[genbank_20GCA_5F001481775.1_202015-12-23]
381 sequences; 37,970,415 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq3 129 6e-25
>seq3
Length=984773
Score = 129 bits (142), Expect = 6e-25
Identities = 348/527 (66%), Gaps = 13/527 (2%)
Strand=Plus/Minus
Query 16999 GATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATAT 17058
||| || ||||| || || |||| || ||||| |||| ||||| | ||| || ||
Sbjct 415072 GATTAGCTCGTTGGAGAAGGTCAGGCCAGGCATGAGACCTCTCTTCTTGAGCCAGAAGAT 415013
Query 17059 CGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTC 17118
| ||| || | || ||||| |||||||| |||| ||||| || | | || |
Sbjct 415012 GGAGGCAAAGGCTCCGCTGAAGAAGATACCCTCAACGGCAGCAAAGGCAACGAGACGCTG 414953
Query 17119 GGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTT-TTGCTTTA 17177
||| | | | ||| |||| ||||||| || |||| ||||| || |||| |
Sbjct 414952 GGCAAAGGAAGAGTCCTTGTCCTGAATCCACTTGATGGCCCAGTCGGCCTTCTTGCGA-A 414894
Query 17178 TGCAATCCATCGTTTCTATGGCCTTAAATAATTT-CTCTTTTTCCTGTAGGTCGATTATA 17236
||||| || || || ||||| || || | | || | |||| | || | |
Sbjct 414893 TGCAAGGAATGGTCTCAATGGCGTTGAAGAGGTAGCTGCGCTGGCTGT-GCTCCTTGACG 414835
Query 17237 TACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAAT 17296
|| || |||||||| || ||| | |||||||| ||||||||||| ||||| ||
Sbjct 414834 TAGGTGTCGATGAGCAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAA 414775
Query 17297 CCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTT 17356
||||| |||||||| || || | || ||||| || || ||| || || | || ||
Sbjct 414774 CCGTAGAAGCATCGAGCCTCGGGGATCTGAACCTCGCCGCTGAAACGCTCGACCAGGTTC 414715
Query 17357 TCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTT 17416
||||| || ||||||||| || || || || |||| || || ||||| || ||
Sbjct 414714 TCGTTGACAATGCCGTCGGAGGCAGCAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTC 414655
Query 17417 TCGTCCGGTGTAAGAACGCG------CCAGTCCTTTAAATCTTTGGATATATCCACTTCT 17470
||||| | || ||| |||||| | | ||| ||||| | ||| | ||
Sbjct 414654 TCGTCATCGTTCAG---GCGGTTGTTCCAGTCGTGCAGATCCTTGGACAGATCAATCTCC 414598
Query 17471 TCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517
|||| |||||| || |||| | |||||||| ||||| | ||| ||
Sbjct 414597 TCGGCGGTCCAGAAGGAAGCCTCGGCCTTTTTGTACATTTGCCAGAT 414551
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517543135189080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |