Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20gamsii_20[genbank_20GCA_5F001481775.1_202015-12-23] 381 sequences; 37,970,415 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 2e-12 >seq1 Length=1198811 Score = 87.8 bits (96), Expect = 2e-12 Identities = 117/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 20930 ATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGT 20989 ||| | ||||| |||| ||||| ||||| |||| | ||| ||| |||||| Sbjct 1128746 ATCGATGTGGTCAATGTAGACGTGTGCGTCTCCCATGACGTGGGTAAATGTTCCCGGTAC 1128687 Query 20990 CAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGG 21049 ||| | ||||| |||| || | ||||| || |||||||| || ||||| ||||| Sbjct 1128686 AAGGTCGCAAACGTGGGCGAGCATGTGAGTCAGCAGTGCGTAGCTTGCAATGTTGAACGG 1128627 Query 21050 GACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAG 21092 | ||||||||||||||| ||| | ||| || ||||||||| Sbjct 1128626 AATACCGAGGCCCATGTCGCAGGATCGCTGATATAGCTGGCAG 1128584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427774013648880