Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20gamsii_20[genbank_20GCA_5F001481775.1_202015-12-23] 381 sequences; 37,970,415 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq24 111 2e-19 >seq24 Length=472585 Score = 111 bits (122), Expect = 2e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || || |||||||| || | |||||| ||||||| |||||||| || || | Sbjct 84990 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCGTCTTCCAGCTGCTTACCAGCGAAG 84931 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 || || ||||||||||| || ||||| || || || || || || ||| ||| || Sbjct 84930 ATAAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGAATCTTTGACTTGACGTTG 84871 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | |||||| | |||||||||| || | |||||||||||||||||| || || Sbjct 84870 TCGATGGTATCAGATGACTCCACTTCTAGTGTGATGGTCTTGCCGGTCAAAGTCTTGACA 84811 Query 64433 AAAATTTGCAT 64443 || || ||||| Sbjct 84810 AAGATCTGCAT 84800 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || || | || || || || || ||||||||||| | |||||| |||| Sbjct 84784 AAGGACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCGTC 84725 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || |||||||| || ||| | ||||| ||||||||||||||||| || || || || || Sbjct 84724 CTCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTC 84665 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| || || | ||||| | || || || | ||| | ||| Sbjct 84664 CTGGATCTTGGACTTGACGTTGTCAATGGTATCGGATGACTCGACCTCGAGAGTGATGGT 84605 Query 64411 CTTGCCGGTCAAAGTTTTTACGA 64433 |||||| || | || || |||| Sbjct 84604 CTTGCCAGTGAGGGTCTTGACGA 84582 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | | || || | || || || |||||||| Sbjct 84483 GTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGGCCATCCTCGAGTTGCTTGCCA 84424 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || || ||||||||||| |||||||| || || || || || || || ||| Sbjct 84423 GCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTC 84364 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || || | ||||| || | ||| | |||||||||||| | || Sbjct 84363 ACATTGTCGATAGTGTCGGAAGACTCCACCTCGAGAGTGATGGTCTTGCCGGTGAGGGTC 84304 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| |||||||| Sbjct 84303 TTGACGAAGATTTGCAT 84287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499642420441640