Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20gamsii_20[genbank_20GCA_5F001481775.1_202015-12-23] 381 sequences; 37,970,415 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq22 102 6e-16 >seq22 Length=507059 Score = 102 bits (112), Expect = 6e-16 Identities = 180/255 (71%), Gaps = 8/255 (3%) Strand=Plus/Minus Query 671522 GGACAGGTTATTGTTGAAGGAAAAAGAATTCAAATCAGATTCAATGGTA--GAACACTTC 671579 |||||| ||||| |||||||| | |||| | || | ||||| ||| |||| |||| Sbjct 395645 GGACAGCAGATTGTCGAAGGAAAGCGTATTCCATTCGGCTTCAA--GTACCGAACGCTTC 395588 Query 671580 CA-ATGTTCCCTAAATTCGATGACAGTGCATTTTCCAGAGGTTTTTGTCGA-AATTCTTT 671637 | || || || || |||| || | || || | || ||| || || || || | Sbjct 395587 CCCATTTTACC-AAGGACGATTACTCTCCAGAGGCCCGCGGCTTT-GTAGAGAACTCGTA 395530 Query 671638 TATTGAGGGTCTTGGACCTTTTGAATTTTTCTTCCAAGTAATGGCAGGTCGTGAAGGTAT 671697 | || |||||| || | |||||||||||||| | ||||| |||||||||||| | Sbjct 395529 TCTTCGTGGTCTTACTCCGTCAGAATTTTTCTTCCACGCCATGGCTGGTCGTGAAGGTCT 395470 Query 671698 TATTAATACGGCTATTAAAACTGCTGATACTGGTTATATTCAAAGAAAACTTGTTAAAAT 671757 |||| |||| ||| | ||||| || || |||||||| ||||| ||| || || ||| Sbjct 395469 TATTGATACCGCTGTCAAAACAGCCGAGACTGGTTACATTCAGAGACGTCTCGTCAAAGC 395410 Query 671758 GCTCGAAGATATCAA 671772 || |||||| |||| Sbjct 395409 TCTGGAAGATCTCAA 395395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780803493524986