Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20gamsii_20[genbank_20GCA_5F001481775.1_202015-12-23] 381 sequences; 37,970,415 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq57 246 4e-60 >seq57 Length=232149 Score = 246 bits (272), Expect = 4e-60 Identities = 469/688 (68%), Gaps = 6/688 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||||||||| || || || || || | ||||| || |||||||| Sbjct 78240 TCGAAATCCTCACCACCCAAGTGAGTGTCACCGGCAGTGGACTTGACCTCGAAGATACCC 78299 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | | || ||||| || ||||||||||| || || || ||||| ||| Sbjct 78300 TCCTCAATGGTCAGGAGAGAGACATCGAAAGTACCACCACCGAGATCGAAGATGAGGACG 78359 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || ||||| || |||||||| || || || || || || || || Sbjct 78360 TTGCGCTCGCCCTCGACCTTCTTGTCAAGACCGTAGGCAATGGCAGCAGCGGTGGGCTCG 78419 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| || ||| || || ||||| | ||||| || || || || || Sbjct 78420 TTGATGATACGCAGGACGTTGAGACCGGCAATGAGACCGGCATCCTTGGTAGCCTGACGC 78479 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || ||||| |||||||| ||||| || ||||| |||| |||| | ||| || Sbjct 78480 TGGCTGTCGTTGAAGTAGGCGGGGACAGTAACGACGGCGTTGTTGACGGTGCCACCCAGG 78539 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || | || ||| | || ||| ||||| || | ||| || || ||||| || | | Sbjct 78540 TAGGCCTCAGCGGTCTCACGCATCTTGGTCAGGATCATGGAGGAGATCTCCTCGGGGGTG 78599 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 || | || || || || || || || || || | | ||| || |||| | | | Sbjct 78600 AAGTTCTTGGTCTCGCCCTTGAACTCGACCTCGACGACGGGCTT-GCCGC--CCTTGTCG 78656 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 | || ||| | | | | ||||| || | ||||||| |||| || ||||| | Sbjct 78657 ACAATCTTGAAGGGGAAGTGCTTCATGTCAGCCTGGACCTCGGGGTCGGAGAACTTGCGA 78716 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 || || | ||||| || || || || ||||| | |||||||||||| |||||||| Sbjct 78717 CCAATCAATCGCTTGGCGTCGAAGACGGTGTTCTGGGGGTTCATGGCGACCTGGTTCTTG 78776 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || || || || || ||||| || | || || || || ||| |||| ||||||||| Sbjct 78777 GCGGCATCACCAATCAGACGCTC---GGTGTCGGTGAAGGCAACGAACGAAGGGGTCGTT 78833 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCAC 8116 || || || |||||||| ||||| || || ||||| | | ||| |||||||| Sbjct 78834 CGGTTACCCTGGTCGTTGGCAATGATGTCACATCGGTCCTCACGGAAGATACCGACGCAA 78893 Query 8117 GAATACGTTGTTCCTAAATCAATACCGA 8144 || ||||| || || | || ||||||| Sbjct 78894 GAGTACGTAGTACCCAGGTCGATACCGA 78921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635129775180040