Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20gamsii_20[genbank_20GCA_5F001481775.1_202015-12-23] 381 sequences; 37,970,415 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq24 93.3 3e-13 >seq24 Length=472585 Score = 93.3 bits (102), Expect = 3e-13 Identities = 121/165 (73%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 480606 AGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGA 480665 ||||||| | ||| || |||||||| ||||| || || ||||| || || ||||||||| Sbjct 84453 AGAGTTCGGCCATCCTCGAGTTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGA 84394 Query 480666 ATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGT 480724 || || |||||||| |||||||| || ||| || ||||| || | | | | Sbjct 84393 ATGCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCGATAGTGTCGGAAGACTCCA-C 84335 Query 480725 TTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || || |||||||| ||||| ||||| ||||| Sbjct 84334 CTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTG 84290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268162857061388