Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20gamsii_20[genbank_20GCA_5F001481775.1_202015-12-23] 381 sequences; 37,970,415 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq24 95.1 2e-14 >seq24 Length=472585 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | || || ||||| || | |||| ||| || || || |||||| Sbjct 84516 ATACCACCACGGAGGCGGAGGACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCG 84457 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | |||| ||| || | ||| || || || || || | | ||| || |||||| Sbjct 84456 GACAGAGTTCGGCCATCCTCGAGTTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGA 84397 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || || || || || || |||| || | ||| ||||| ||||||||||| Sbjct 84396 GGAATGCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCGATAGTGTCGGAAGACTCC 84337 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| || || || || || || || || || || |||||||| Sbjct 84336 ACCTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 84287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899650115395920