Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20gamsii_20[genbank_20GCA_5F001481775.1_202015-12-23] 381 sequences; 37,970,415 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq3 120 3e-22 >seq3 Length=984773 Score = 120 bits (132), Expect = 3e-22 Identities = 221/324 (68%), Gaps = 0/324 (0%) Strand=Plus/Plus Query 34311 GATGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACC 34370 ||||| || ||||| ||||| | |||| | || | || || ||| |||||| || Sbjct 607905 GATGACATCGGTCTCAGGGTTCTTGCATTTCTTGCAGAGGACGAATTTGTTGATGAAGCC 607964 Query 34371 ATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 ||| || ||||||| | ||| | | ||||||| |||||||| ||| | || |||| Sbjct 607965 ATCGAGATGGTCCTGCAGCTTGGCAGCATCGTGGGCGCCGTTGATGATCCAACGGTCGTC 608024 Query 34431 TTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAAT 34490 ||| || | | || || || || |||||| | || |||||||| | || Sbjct 608025 CTTGGGGTCAATGTTGGTCTGAGCACCAAGCTCGAAACCAAAGTACTTGATGACATAGGA 608084 Query 34491 GGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCC 34550 | || || |||| | || |||| || || |||||||| || |||||||| || Sbjct 608085 ACCAGGGCGAGCAAGAGACTGAGCGACGCTGGACAAGTTGACGACAACGGTCTTGATACC 608144 Query 34551 GTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTC 34610 ||| ||||| ||||| | ||||| ||||||| ||| |||||||||||||| || || Sbjct 608145 GTTACCCTTGCCTTCAATCTTGGTCTGGATGCGCTCCATCTTGTAGCGGTAGAAGGCATC 608204 Query 34611 CGCCACATTGCGGTTAACGTTCAC 34634 |||| ||| |||||| || Sbjct 608205 GCTGACATCGCGACGAACGTTGAC 608228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412839682995833