Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20gamsii_20[genbank_20GCA_5F001481775.1_202015-12-23] 381 sequences; 37,970,415 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq24 89.7 4e-13 >seq24 Length=472585 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || |||||||| ||||| || ||||| ||||| || | ||| |||| | Sbjct 84800 ATGCAGATCTTTGTCAAGACTTTGACCGGCAAGACCATCACACTAGAAGTGGAGTCATCT 84859 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| ||| | | || || ||||||| || || || ||| | ||| || ||| Sbjct 84860 GATACCATCGACAACGTCAAGTCAAAGATTCAGGACAAGGAGGGCATTCCCCCTGACCAG 84919 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | ||||| | || ||||| |||||||| |||| || || ||||||||| Sbjct 84920 CAGCGCCTTATCTTCGCTGGTAAGCAGCTGGAAGACGGTCGCACCCTGAGCGACTACAAC 84979 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGT 107764 || || |||||| || ||||| |||| Sbjct 84980 ATCCAGAAGGAGAGCACCCTGCACTTGGT 85008 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| || ||||| || | || ||||| ||||| || |||| |||| || | Sbjct 84287 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTCGAGGTGGAGTCTTCC 84346 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| ||| | | || || |||||| || || || ||| | || || ||| Sbjct 84347 GACACTATCGACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAG 84406 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || || | || || || || || ||||| | | ||| || | ||||||||| Sbjct 84407 CAGCGTCTGATCTTCGCTGGCAAGCAACTCGAGGATGGCCGAACTCTGTCCGACTACAAC 84466 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGT 107764 || || ||||||||||| | ||| |||| Sbjct 84467 ATCCAGAAGGAGTCTACCCTCCACCTGGT 84495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398874947840509