Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20gamsii_20[genbank_20GCA_5F001481775.1_202015-12-23] 381 sequences; 37,970,415 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq24 91.5 6e-13 >seq24 Length=472585 Score = 91.5 bits (100), Expect = 6e-13 Identities = 120/163 (74%), Gaps = 5/163 (3%) Strand=Plus/Plus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | || || ||||||||||| |||||||| | |||||||| | || || Sbjct 320246 CTCGATCAAGTGAGCAATTGTCATACGAGACGGAATGGCGTGGGGGTTGATAATGATATC 320305 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATAT-CTTCTTCAGGTACAATCAAACCAA 309802 ||| | | || ||| | |||||||||| || || |||| | | | ||||| Sbjct 320306 TGGTGTGAGACCTTCTCTTGAG---AAAGGCATATCCTCCTGTCGGTA-AGTAACACCAA 320361 Query 309803 TAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 |||| ||||||||| |||| | |||||||||||||| ||||| Sbjct 320362 TAGTGCCCTTTTGACCGTGACGAGAAGCAAACTTGTCTCCAAT 320404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951964871314968