Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20gamsii_20[genbank_20GCA_5F001481775.1_202015-12-23] 381 sequences; 37,970,415 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq9 96.9 8e-15 >seq9 Length=716796 Score = 96.9 bits (106), Expect = 8e-15 Identities = 254/384 (66%), Gaps = 8/384 (2%) Strand=Plus/Plus Query 110701 GAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCAT 110757 ||||||||||| ||||||| | ||| || | || ||||| ||| | ||| | | Sbjct 53208 GAGTCTTCAACAACACTGCCAGATACGTCGACCAGGGTGGCAACAAGCGCCCTGGAGCCT 53267 Query 110758 TTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAA 110817 |||| ||||| ||||| |||||||| | ||| | ||||| ||| | || || || || | Sbjct 53268 TTGCCATCTACCTCGAGCCTTGGCACGCTGATGTTTTTGAGTTCCTTGACCTCCGCAAGA 53327 Query 110818 ATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATT 110877 | || || ||||| | || ||||| | || || | ||||| | ||| Sbjct 53328 ACCACGGCAAGGAAGAGGTCCGTGCCCGTGACCTGTTCCTCGCTCTCTGGATCCCTGATC 53387 Query 110878 TATTCATGAAACGTGTT--CAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTC 110935 | |||||||| |||||| ||||| ||| ||| || | ||||| ||| | | Sbjct 53388 TGTTCATGAAGCGTGTTGAGAAGAACTTGG--ACTGGACTTTGATGTGCCCTAACGAATG 53445 Query 110936 TCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAA 110995 ||||| || |||| ||||| |||| || || | || || || || ||||| || Sbjct 53446 CCCTGGCCTTGCTGACTGCTATGGCGAAGAATTCGAGGCGCTGTATGAGAAGTATGAGAA 53505 Query 110996 AGAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATC 111055 ||||| ||| |||||| || | |||||| | || |||| | ||||| || | Sbjct 53506 GGAAGGAAAGGGTCGCAAGACTATCCGAGCTCAGAAGCTGTGGTACTCTATCCTAGAGGC 53565 Query 111056 ACAAGTTGAAACTGG-AACTCCTT 111078 || ||| ||||| ||| |||| Sbjct 53566 CCAGACTGAGACTGGCAACCCCTT 53589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186807006499141