Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20gamsii_20[genbank_20GCA_5F001481775.1_202015-12-23] 381 sequences; 37,970,415 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq24 84.2 5e-11 >seq24 Length=472585 Score = 84.2 bits (92), Expect = 5e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || | || || || || ||||| | |||||||| ||||| Sbjct 84803 CAGATCTTTGTCAAGACTTTGACCGGCAAGACCATCACACTAGAAGTGGAGTCATCTGAT 84862 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||| || || || || ||| || ||| || Sbjct 84863 ACCATCGACAACGTCAAGTCAAAGATTCAGGACAAGGAGGGCATTCCCCCTGACCAGCAG 84922 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | ||||||||||| || |||||| ||||||| || | || || ||| |||||| || Sbjct 84923 CGCCTTATCTTCGCTGGTAAGCAGCTGGAAGACGGTCGCACCCTGAGCGACTACAACATC 84982 Query 206353 CAGAAAGAG 206361 ||||| ||| Sbjct 84983 CAGAAGGAG 84991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181815030867901