Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20gamsii_20[genbank_20GCA_5F001481775.1_202015-12-23]
381 sequences; 37,970,415 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq9 156 6e-33
>seq9
Length=716796
Score = 156 bits (172), Expect = 6e-33
Identities = 400/608 (66%), Gaps = 6/608 (1%)
Strand=Plus/Minus
Query 69351 GATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAA 69410
||| || ||||| || | ||| || ||||| ||| || || ||||||||||| || ||
Sbjct 53647 GATGGTTCCCAGGTTCTTCTGGTTGCTCTTACGGTTGCAAGCATCCTTGTAAAGCATGAA 53588
Query 69411 CGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTAT 69470
|| | ||||| ||| |||| | || | ||||| | ||| | | ||| ||
Sbjct 53587 GGGGTTGCCAGTCTCAGTCTGGGCCTCTAGGATAGAGTACCACAGCTTCTGAGCTCGGAT 53528
Query 69471 TACGGTCTTGTAACGCTTCTCTT---TTTCATATTGTGTATATAGCCGTTCGAATTCATC 69527
|||||| || ||| ||| | ||||| | ||| ||| |||||||| ||
Sbjct 53527 A---GTCTTGCGACCCTTTCCTTCCTTCTCATACTTCTCATACAGCGCCTCGAATTCTTC 53471
Query 69528 TCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATC 69587
|| | ||| | | ||||| ||||| || || |||||||| | ||| | |
Sbjct 53470 GCCATAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACATCAAAGTCCAGTCCAAGTT 53411
Query 69588 ATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGT 69647
| || ||| || ||||| || ||||| || ||||| ||||| | || || || | ||
Sbjct 53410 CTTCTCAACACGCTTCATGAACAGATCAGGGATCCAGAGAGCGAGGAACAGGTCACGGGC 53351
Query 69648 TCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATG 69707
| ||||| || || || || || || || ||||| | || ||||| ||
Sbjct 53350 ACGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAACTCAAAAACATCAGCGTG 53291
Query 69708 CCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTA 69767
||| || || || || || || | | |||| || || || || || ||||| || | |||
Sbjct 53290 CCAAGGCTCGAGGTAGATGGCAAAGGCTCCAGGGCGCTTGTTGCCACCCTGGTCGACGTA 53231
Query 69768 TCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGT 69827
|||||||||||| || |||||| ||||| || || ||||| || || |||| || ||
Sbjct 53230 TCTGGCAGTGTTGTTGAAGACTCGAAGCATGGGGATGATACCGTTGGAGGTACCGTTGGT 53171
Query 69828 TCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGC 69887
|| | ||| ||| || | || || ||| | || || || || || ||
Sbjct 53170 GCCGGCAATGTAAGAGCCCGTGGCACGGATACGGTGGACGTTCAGGCCGATACCACCAGC 53111
Query 69888 CATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATC 69947
||| || || || | ||||| ||||| ||||| || |||||||| ||||| || ||
Sbjct 53110 CATCTTGGAAATCATGGCACATGTCTTCAAAGTGTCGTAGATACCCTCAATGCTGTCGTC 53051
Query 69948 TATCATGT 69955
||||||
Sbjct 53050 CTTCATGT 53043
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686905528596840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |