Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20gamsii_20[genbank_20GCA_5F001481775.1_202015-12-23] 381 sequences; 37,970,415 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq24 95.1 1e-14 >seq24 Length=472585 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || ||||||||||||| | |||| ||||||| ||||| ||||| ||| | Sbjct 84990 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCGTCTTCCAGCTGCTTACCAGCGAAG 84931 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || || ||||| || || || || | ||||| || || ||||| || | | | Sbjct 84930 ATAAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGAATCTTTGACTTGACGTTG 84871 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | || || | | || |||||||| || || | ||||| |||| ||| || ||| Sbjct 84870 TCGATGGTATCAGATGACTCCACTTCTAGTGTGATGGTCTTGCCGGTCAAAGTCTTGACA 84811 Query 27237 AAGATTTGCATA 27248 ||||| |||||| Sbjct 84810 AAGATCTGCATA 84799 Score = 86.0 bits (94), Expect = 5e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || || || ||||| ||||||| | |||| |||| |||||||| ||||| Sbjct 84768 GTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCGTCCTCGAGCTGCTTACCA 84709 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | ||||||||||| || || || || | |||||| || || ||||||| || Sbjct 84708 GCAAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTGGACTTG 84649 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | || || | | || || || ||||| || | ||||| || || || Sbjct 84648 ACGTTGTCAATGGTATCGGATGACTCGACCTCGAGAGTGATGGTCTTGCCAGTGAGGGTC 84589 Query 27231 TTCAC 27235 || || Sbjct 84588 TTGAC 84584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424932426843672