Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20gamsii_20[genbank_20GCA_5F001481775.1_202015-12-23] 381 sequences; 37,970,415 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq3 129 2e-24 >seq3 Length=984773 Score = 129 bits (142), Expect = 2e-24 Identities = 363/544 (67%), Gaps = 19/544 (3%) Strand=Plus/Plus Query 443337 TTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTA 443396 || |||||| |||||||||||||| |||||||| || ||| |||||| | || || Sbjct 414584 TTCTGGACCGCCGAGGAGATTGATCTGTCCAAGGATCTGCACGACTGGAACAACCGCCTG 414643 Query 443397 TCTAGCCATGAACGCGATTT-CTTCAAATG---CATCTTGGCCTTCTTTGCACCGAGCGA 443452 | | |||| || || | ||||| | |||| ||||||||||||| | ||| Sbjct 414644 ---AACGATGA-CGAGAAGTACTTCATCTCTCACATCCTGGCCTTCTTTGCTGCCTCCGA 414699 Query 443453 CGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGC 443512 ||| || ||| ||||| ||||| ||||||| || ||| | | ||||||| Sbjct 414700 CGGCATTGTCAACGAGAACCTGGTCGAGCGTTTCAGCGGCGAGGTTCAGATCCCCGAGGC 414759 Query 443513 CCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCA 443572 || | |||||||| ||||| | ||||||||||| ||| ||||| |||| || Sbjct 414760 TCGATGCTTCTACGGTTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCTCT 414819 Query 443573 GTTGATCAAGACACTAATTCCGAACGAAGACGAACAGCGGTCCATCTTCT-CATCGTTCA 443631 | | ||| | || ||| || || || || ||||| | | ||| || || || Sbjct 414820 GCTCATCGACAC-CTACGTC--AAGGAGCACAGCCAGCGCAGCTACCTCTTCAACGC-CA 414875 Query 443632 T---GACCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAACGAG 443688 | ||||| || |||| | ||| | |||||| | ||||| | | || Sbjct 414876 TTGAGACCATTCCTTGCATTCGCAAGAAGGCCGACTGGGCCATCAAGTGGATTCAG-GAC 414934 Query 443689 AAAATCTCAGC-TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTT 443747 || ||| | || | | |||| || || || ||||||| || || || | || || Sbjct 414935 AAGGACTCTTCCTTTGCCCAGCGTCTCGTTGCCTTTGCTGCCGTTGAGGGTATCTTCTTC 414994 Query 443748 AGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGAC 443807 ||||| ||| || ||||||||||||||| | || ||| | || || |||| || ||||| Sbjct 414995 AGCGG-AGCCTTTGCCTCCATCTTCTGGCTCAAGAAGAGAGGTCTCATGCCTGGCCTGAC 415053 Query 443808 CTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867 ||| ||||| || ||| ||| || |||||| |||| |||||| || || || || Sbjct 415054 CTTCTCCAACGAGCTAATCTCTCGTGATGAGGGTCTGCACACCGACTTTGCTTGCCTGCT 415113 Query 443868 CTAC 443871 | || Sbjct 415114 CCAC 415117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588328246438545