Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20gamsii_20[genbank_20GCA_5F001481775.1_202015-12-23] 381 sequences; 37,970,415 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 2e-11 >seq1 Length=1198811 Score = 84.2 bits (92), Expect = 2e-11 Identities = 155/225 (69%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 27499 TACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 27558 || ||||| || || |||| ||| ||||| ||||| || || || ||||| || | || Sbjct 1128337 TATTCTGCGCCAAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCTAGGTCGCCGACGTCG 1128278 Query 27559 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 27618 | ||| || |||| |||| | || || | ||| |||||| ||||||||||||| Sbjct 1128277 CGGTGGGTGAGGCCCACGCTGTCGAGGAACTCGCGGGAGCCGTTGCCGTCCCAGATCTTG 1128218 Query 27619 ACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTG-GACCCTCTGACGAACCACAGCAGCTC 27677 || || ||| ||| | ||||| ||| ||||| || |||||| || ||||| Sbjct 1128217 ACGCCGACGTCGCTGAGGGCGGTGGAGGAGGTGTTGCCCTC-GATGAACCAGAGGAGCTC 1128159 Query 27678 CTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 | | |||||| ||||| | |||||| ||||| ||||| Sbjct 1128158 GGCGATGACGGCGCGGAGGAAGACTCGCTTGGTGGTGAGCAGGGG 1128114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369505484216411