Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq8 127 4e-24
>seq8
Length=2103943
Score = 127 bits (140), Expect = 4e-24
Identities = 319/474 (67%), Gaps = 8/474 (2%)
Strand=Plus/Plus
Query 230170 TCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCG-GGAG 230228
|| |||||| |||| || || |||| | ||||| ||||| || | ||| | || |
Sbjct 373852 TCCTTTGCCCAGCGCCTGGTTGCCTTTGCCGCCGTTGAGGGTAT-CT-TCTTCAGCGGTG 373909
Query 230229 TTTCTGCG-CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTA 230287
| ||| ||||||| ||||| ||| |||| | |||||||| || | || |
Sbjct 373910 CCTTTGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCTGGTCTGACCTTTTCCA 373969
Query 230288 ACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCA 230346
||||| ||||| ||| ||||||||||| || || | | || | | || || | ||
Sbjct 373970 ACGAGCTCATCTCTCGTGACGAGGGTCTGCA-CACCGACTTTGCCTGCCTGCTGCACTCT 374028
Query 230347 AAGCTCCAGAACAA-GCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGA 230405
| ||| ||||| || | || || | || | ||||| || || || ||
Sbjct 374029 CACCTCAAGAACCGCGCCAGCAAGGAAGT-GATCCGTGACATCATCACCGATGCTGTCCG 374087
Query 230406 AAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGA 230465
|| || | |||||| | || ||| | || || ||| ||||||||||| | |
Sbjct 374088 AATTGAGCAAGAGTTCTTGACCGAGGCTCTCCCTTGCGCCCTCCTTGGCATGAACTCCAA 374147
Query 230466 ACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGA 230525
|| ||| |||||||| || ||||| ||||| || | |||| || || || ||||
Sbjct 374148 CCTGATGAAGCAGTACATTGAGTTCGTCGCCGATCGTCTGCTTGTCGCTCTCGGCAACGA 374207
Query 230526 GAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAA 230585
||| | ||||| ||| |||||||| | || |||||| |||||| || || ||
Sbjct 374208 GAAGATCTACAAGTCTGCCAACCCCTTCGACTTCATGGAGAACATTTCTCTCGGTGGCAA 374267
Query 230586 GACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATGAA 230639
||||||||||||||| ||||| ||| ||||| |||| | ||||||| |||||
Sbjct 374268 GACCAACTTCTTCGAGAAGCGCGTCGCCGACTACCAGAAGGCTGGTGTCATGAA 374321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823146137690
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |