Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq8 127 4e-24 >seq8 Length=2103943 Score = 127 bits (140), Expect = 4e-24 Identities = 319/474 (67%), Gaps = 8/474 (2%) Strand=Plus/Plus Query 230170 TCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCG-GGAG 230228 || |||||| |||| || || |||| | ||||| ||||| || | ||| | || | Sbjct 373852 TCCTTTGCCCAGCGCCTGGTTGCCTTTGCCGCCGTTGAGGGTAT-CT-TCTTCAGCGGTG 373909 Query 230229 TTTCTGCG-CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTA 230287 | ||| ||||||| ||||| ||| |||| | |||||||| || | || | Sbjct 373910 CCTTTGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCTGGTCTGACCTTTTCCA 373969 Query 230288 ACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCA 230346 ||||| ||||| ||| ||||||||||| || || | | || | | || || | || Sbjct 373970 ACGAGCTCATCTCTCGTGACGAGGGTCTGCA-CACCGACTTTGCCTGCCTGCTGCACTCT 374028 Query 230347 AAGCTCCAGAACAA-GCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGA 230405 | ||| ||||| || | || || | || | ||||| || || || || Sbjct 374029 CACCTCAAGAACCGCGCCAGCAAGGAAGT-GATCCGTGACATCATCACCGATGCTGTCCG 374087 Query 230406 AAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGA 230465 || || | |||||| | || ||| | || || ||| ||||||||||| | | Sbjct 374088 AATTGAGCAAGAGTTCTTGACCGAGGCTCTCCCTTGCGCCCTCCTTGGCATGAACTCCAA 374147 Query 230466 ACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGA 230525 || ||| |||||||| || ||||| ||||| || | |||| || || || |||| Sbjct 374148 CCTGATGAAGCAGTACATTGAGTTCGTCGCCGATCGTCTGCTTGTCGCTCTCGGCAACGA 374207 Query 230526 GAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAA 230585 ||| | ||||| ||| |||||||| | || |||||| |||||| || || || Sbjct 374208 GAAGATCTACAAGTCTGCCAACCCCTTCGACTTCATGGAGAACATTTCTCTCGGTGGCAA 374267 Query 230586 GACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATGAA 230639 ||||||||||||||| ||||| ||| ||||| |||| | ||||||| ||||| Sbjct 374268 GACCAACTTCTTCGAGAAGCGCGTCGCCGACTACCAGAAGGCTGGTGTCATGAA 374321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823146137690