Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq8 131 2e-25
>seq8
Length=2103943
Score = 131 bits (144), Expect = 2e-25
Identities = 575/890 (65%), Gaps = 35/890 (4%)
Strand=Plus/Minus
Query 16652 TGTTTATGAACAACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTT 16711
|||| |||| || || || |||| |||| ||| ||||| || ||||| ||||| ||
Sbjct 374323 TGTTCATGA-CACCAGCC-TTCT--GGTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTC 374268
Query 16712 TTGCCCTCTAGAGATATATTCTCCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTT 16769
||||| | ||||| || ||||||||||| || || || || | || || | || ||
Sbjct 374267 TTGCCACCGAGAGAAATGTTCTCCATGAAGTCGAAGGGGTTGGCAGACTTGTAGATCTTC 374208
Query 16770 TAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTA 16829
| | | || || || | | | | ||| || || || || || || || ||| |
Sbjct 374207 TCG--TTGCCGAGAGCGACAAGCAGACGATCGGCGACGAACTCAATGTACTGCTTCATCA 374150
Query 16830 ATTCGCAGTTCATTCCTATAAGA-CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCT 16888
| | ||||||| || | || || | ||| |||| || ||||| || ||||||
Sbjct 374149 GGTTGGAGTTCATGCCAAGGAGGGCGCAAGGGA-GAGCCTCGGTCAAGAACTCTTGCTCA 374091
Query 16889 ATAACAACCGCTTCCTTAATAAT---ACT-AGCAACTCGTTCCTCGGACGGTGTATGTTT 16944
|| || || || | || || || | || || || || | |||| ||
Sbjct 374090 ATTCGGACAGCATCGGTGATGATGTCACGGATCACTTCCTTGCTGGCGCGGTTCTTG--- 374034
Query 16945 AAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAG 17004
|| || || ||| || || || ||| || | |||||||| | ||| ||
Sbjct 374033 -AGGTGAGAGTGCAGCAGGCAGGCAAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAG 373975
Query 17005 TTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGC 17064
||||| ||||| |||| || ||||| ||||| ||||| | ||| || || | |||
Sbjct 373974 CTCGTTGGAAAAGGTCAGACCAGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGC 373915
Query 17065 GAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTA 17124
|| | || ||||| |||||||| |||| ||||| || | | || | ||| |
Sbjct 373914 AAAGGCACCGCTGAAGAAGATACCCTCAACGGCGGCAAAGGCAACCAGGCGCTGGGCAAA 373855
Query 17125 CGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTT-TTGCTTTATGCAAT 17183
| | || |||| | ||||| || |||| ||||| || |||| ||||||
Sbjct 373854 GGAAGAGTTCTTGTCCTGGATCCACTTGATGGCCCAGTCGGCCTTCTTGCGA-ATGCAAG 373796
Query 17184 CCATCGTTTCTATGGCCTTAAATAATTT-CTCTTTTTCCTGTAGGTCGATTATATACGTA 17242
|| || || ||||| || || | | || | |||| || | || || |||
Sbjct 373795 GAATGGTCTCAATGGCGTTGAAGAGGTAGCTGCGCTGGCTGTTC-TCCTTGATGTAGGTA 373737
Query 17243 TCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAA 17302
|||||||| ||| ||| | |||||||| ||||||||||| ||||| || |||||
Sbjct 373736 TCGATGAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAG 373677
Query 17303 AAGCATCGGGCTTCCGCTATTTGAACTT--CCACGTAGAATCGTTCCGCTAGATTTTCGT 17360
|||||||| || || | || || || | |||| || || || || | || || ||||
Sbjct 373676 AAGCATCGAGCCTCGGGGATCTGGACCTCGCCAC-TA-AAGCGCTCGACCAGGTTCTCGT 373619
Query 17361 TCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGT 17420
| || ||||| || ||||| || || |||| || || ||||| || || ||||
Sbjct 373618 TGACAATGCCATCAGAGGCGGCAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGT 373559
Query 17421 CCGGTGTAAGAACGCG------CCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGG 17474
| | || ||| |||||| | | ||| ||||| | ||| | |||||||
Sbjct 373558 CATCGTTCAG---GCGGTTGTTCCAGTCGTGCAGATCCTTGGACAGATCAATCTCTTCGG 373502
Query 17475 GGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTG 17524
|||||| ||| ||| | ||||| || ||||| | ||| || | ||||
Sbjct 373501 CGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCAGATCTAATTG 373452
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545192432840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |