Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq8 131 2e-25 >seq8 Length=2103943 Score = 131 bits (144), Expect = 2e-25 Identities = 575/890 (65%), Gaps = 35/890 (4%) Strand=Plus/Minus Query 16652 TGTTTATGAACAACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTT 16711 |||| |||| || || || |||| |||| ||| ||||| || ||||| ||||| || Sbjct 374323 TGTTCATGA-CACCAGCC-TTCT--GGTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTC 374268 Query 16712 TTGCCCTCTAGAGATATATTCTCCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTT 16769 ||||| | ||||| || ||||||||||| || || || || | || || | || || Sbjct 374267 TTGCCACCGAGAGAAATGTTCTCCATGAAGTCGAAGGGGTTGGCAGACTTGTAGATCTTC 374208 Query 16770 TAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTA 16829 | | | || || || | | | | ||| || || || || || || || ||| | Sbjct 374207 TCG--TTGCCGAGAGCGACAAGCAGACGATCGGCGACGAACTCAATGTACTGCTTCATCA 374150 Query 16830 ATTCGCAGTTCATTCCTATAAGA-CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCT 16888 | | ||||||| || | || || | ||| |||| || ||||| || |||||| Sbjct 374149 GGTTGGAGTTCATGCCAAGGAGGGCGCAAGGGA-GAGCCTCGGTCAAGAACTCTTGCTCA 374091 Query 16889 ATAACAACCGCTTCCTTAATAAT---ACT-AGCAACTCGTTCCTCGGACGGTGTATGTTT 16944 || || || || | || || || | || || || || | |||| || Sbjct 374090 ATTCGGACAGCATCGGTGATGATGTCACGGATCACTTCCTTGCTGGCGCGGTTCTTG--- 374034 Query 16945 AAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAG 17004 || || || ||| || || || ||| || | |||||||| | ||| || Sbjct 374033 -AGGTGAGAGTGCAGCAGGCAGGCAAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAG 373975 Query 17005 TTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGC 17064 ||||| ||||| |||| || ||||| ||||| ||||| | ||| || || | ||| Sbjct 373974 CTCGTTGGAAAAGGTCAGACCAGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGC 373915 Query 17065 GAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTA 17124 || | || ||||| |||||||| |||| ||||| || | | || | ||| | Sbjct 373914 AAAGGCACCGCTGAAGAAGATACCCTCAACGGCGGCAAAGGCAACCAGGCGCTGGGCAAA 373855 Query 17125 CGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTT-TTGCTTTATGCAAT 17183 | | || |||| | ||||| || |||| ||||| || |||| |||||| Sbjct 373854 GGAAGAGTTCTTGTCCTGGATCCACTTGATGGCCCAGTCGGCCTTCTTGCGA-ATGCAAG 373796 Query 17184 CCATCGTTTCTATGGCCTTAAATAATTT-CTCTTTTTCCTGTAGGTCGATTATATACGTA 17242 || || || ||||| || || | | || | |||| || | || || ||| Sbjct 373795 GAATGGTCTCAATGGCGTTGAAGAGGTAGCTGCGCTGGCTGTTC-TCCTTGATGTAGGTA 373737 Query 17243 TCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAA 17302 |||||||| ||| ||| | |||||||| ||||||||||| ||||| || ||||| Sbjct 373736 TCGATGAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAG 373677 Query 17303 AAGCATCGGGCTTCCGCTATTTGAACTT--CCACGTAGAATCGTTCCGCTAGATTTTCGT 17360 |||||||| || || | || || || | |||| || || || || | || || |||| Sbjct 373676 AAGCATCGAGCCTCGGGGATCTGGACCTCGCCAC-TA-AAGCGCTCGACCAGGTTCTCGT 373619 Query 17361 TCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGT 17420 | || ||||| || ||||| || || |||| || || ||||| || || |||| Sbjct 373618 TGACAATGCCATCAGAGGCGGCAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGT 373559 Query 17421 CCGGTGTAAGAACGCG------CCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGG 17474 | | || ||| |||||| | | ||| ||||| | ||| | ||||||| Sbjct 373558 CATCGTTCAG---GCGGTTGTTCCAGTCGTGCAGATCCTTGGACAGATCAATCTCTTCGG 373502 Query 17475 GGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTG 17524 |||||| ||| ||| | ||||| || ||||| | ||| || | |||| Sbjct 373501 CGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCAGATCTAATTG 373452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545192432840