Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq8 109 6e-19 >seq8 Length=2103943 Score = 109 bits (120), Expect = 6e-19 Identities = 367/568 (65%), Gaps = 5/568 (1%) Strand=Plus/Minus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 || || || |||||| || || || ||||| | ||| || ||||||||||| || Sbjct 374018 AGGCAGGCAAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTC 373959 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAG 16318 | || ||||| ||||| ||||| | |||||| || | ||||| | || ||| Sbjct 373958 AGACCAGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAG 373899 Query 16319 AATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTA 16378 || ||||||||||| | ||||| || | | || | || | | || | || | Sbjct 373898 AAGATACCCTCAACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGAAGAGTTCTTGTCC 373839 Query 16379 CGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCC 16438 | ||||| || |||| ||||| || | || ||| || || || ||||| Sbjct 373838 TGGATCCACTTGATGGCCCAGTCGGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCG 373779 Query 16439 TTAAACAATTT-CTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTA 16497 || || | | || | ||| | || | || || ||||| || || | ||| Sbjct 373778 TTGAAGAGGTAGCTGCGCTGGCTGT-TCTCCTTGATGTAGGTATCGATGAGCAGGGAGTA 373720 Query 16498 CATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGC 16557 | || ||||| |||||||| || ||||| || || ||||||||||||||||| | Sbjct 373719 GGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCGGG 373660 Query 16558 TATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGC 16617 || || || || | ||| || || |||||||||| || || || || ||| || Sbjct 373659 GATCTGGACCTCGCCACTAAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGGC 373600 Query 16618 AGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAA---GAATATG 16674 ||||| || |||| ||||| ||||| || || |||||| | | | | | Sbjct 373599 GGCAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTT 373540 Query 16675 CCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGC 16734 ||| || | | ||| ||||| | ||| | ||||| | ||||| || ||| | || Sbjct 373539 CCAGTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCAGAAAGAGGCCTCGGC 373480 Query 16735 CTTTTTATACATTTTCCAAATATCATTG 16762 ||| || ||||||| ||| || | |||| Sbjct 373479 CTTCTTGTACATTTGCCAGATCTAATTG 373452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511413997261160