Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq8 109 6e-19
>seq8
Length=2103943
Score = 109 bits (120), Expect = 6e-19
Identities = 367/568 (65%), Gaps = 5/568 (1%)
Strand=Plus/Minus
Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258
|| || || |||||| || || || ||||| | ||| || ||||||||||| ||
Sbjct 374018 AGGCAGGCAAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTC 373959
Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAG 16318
| || ||||| ||||| ||||| | |||||| || | ||||| | || |||
Sbjct 373958 AGACCAGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAG 373899
Query 16319 AATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTA 16378
|| ||||||||||| | ||||| || | | || | || | | || | || |
Sbjct 373898 AAGATACCCTCAACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGAAGAGTTCTTGTCC 373839
Query 16379 CGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCC 16438
| ||||| || |||| ||||| || | || ||| || || || |||||
Sbjct 373838 TGGATCCACTTGATGGCCCAGTCGGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCG 373779
Query 16439 TTAAACAATTT-CTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTA 16497
|| || | | || | ||| | || | || || ||||| || || | |||
Sbjct 373778 TTGAAGAGGTAGCTGCGCTGGCTGT-TCTCCTTGATGTAGGTATCGATGAGCAGGGAGTA 373720
Query 16498 CATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGC 16557
| || ||||| |||||||| || ||||| || || ||||||||||||||||| |
Sbjct 373719 GGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCGGG 373660
Query 16558 TATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGC 16617
|| || || || | ||| || || |||||||||| || || || || ||| ||
Sbjct 373659 GATCTGGACCTCGCCACTAAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGGC 373600
Query 16618 AGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAA---GAATATG 16674
||||| || |||| ||||| ||||| || || |||||| | | | | |
Sbjct 373599 GGCAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTT 373540
Query 16675 CCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGC 16734
||| || | | ||| ||||| | ||| | ||||| | ||||| || ||| | ||
Sbjct 373539 CCAGTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCAGAAAGAGGCCTCGGC 373480
Query 16735 CTTTTTATACATTTTCCAAATATCATTG 16762
||| || ||||||| ||| || | ||||
Sbjct 373479 CTTCTTGTACATTTGCCAGATCTAATTG 373452
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511413997261160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |