Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq3 219 5e-52
>seq3
Length=3158035
Score = 219 bits (242), Expect = 5e-52
Identities = 520/795 (65%), Gaps = 68/795 (9%)
Strand=Plus/Plus
Query 145536 TTAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTC 145595
|||||| | ||| | |||||| || | | |||||||| |||||||| | | |||||||
Sbjct 1641236 TTAGACGGACATGTTCATGGGAATTGACTTGTGGGGGTCGTAGCCCTTGACCACAAAGTC 1641295
Query 145596 CTCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGG----ATCCTGAGCCTGGGAA 145651
||| || | || |||| ||| | || ||| ||| | ||| ||| || |
Sbjct 1641296 CTCGACCTTCCAGCCATCGATG-CTGCCGCCCTTCTCCCGCGTAATCTCCAGCTCAGGGA 1641354
Query 145652 AGGGCCGGGGGCTCCTGGT-CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACG 145710
| ||||| || ||| | | ||| || || || | || | ||||| || |||||||
Sbjct 1641355 ACGGCCGAGG-CTCACGCTTCAGTTGTGTCTCGAGAGCGTCGATGTGGTCGATGTAGACG 1641413
Query 145711 TGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACC 145770
|| ||||| |||| ||||||| ||| | |||||| | ||| | | ||| |||| |
Sbjct 1641414 TGTGCGTCTCCCATGACGTGGGTGAGGCTTCCGGGCACCAGGTCGCACACGTGAGCGAGC 1641473
Query 145771 ATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCC 145830
|||| || ||||| | |||||||| ||||||||||| | || || |||||||| |
Sbjct 1641474 ATGTGTGTGAGCAGCGCATAGCTGGCGATGTTGAAGGGGATGCCGAGACCCATGTCGCAG 1641533
Query 145831 GAGCGCTGGTACAGCTGGCAGGAGAG---------------------------------- 145856
|| |||||||| ||||||||| |||
Sbjct 1641534 GACCGCTGGTATAGCTGGCAGTGGAGGTGGCCCTTTGGCTTGTTCTCTTCCGTGGGTTCT 1641593
Query 145857 ----------CTCCCCGCCCGCC-------------ACGTAGAACTGGCACAGGAGGTGG 145893
||||||| |||| |||||||||||| | | |||
Sbjct 1641594 GCGGCTCCGACTCCCCGTCCGCGTCCGGGGTACGAAACGTAGAACTGGGCAAACATGTGA 1641653
Query 145894 CAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTC 145953
|||||||||||||||||| | ||| ||||||||| ||| |||||| | |||
Sbjct 1641654 CAGGGCGGCAGGGCCATGCTCTTGAAGTCTCGCGGGTTCCATGCGCTGAGGATCATTCTC 1641713
Query 145954 CTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGC 146013
| | | ||||| | | || || | || ||||||||| |||||||
Sbjct 1641714 CGGTCGTAAGGGTTGTTGCGAAGCTTGTGGATGATCTCGGCGAGCTGGTCGACGCCCTTG 1641773
Query 146014 CCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCG 146073
|| || || | ||| | |||||||||| |||| || ||||||| |||||| || |||
Sbjct 1641774 CCGGCATAGTCCGCCTTTGCGTCCACGTACTCGGCGCCAAAGTGCCGCCACTGAAAGCCG 1641833
Query 146074 TAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCC 146133
|||||||| |||||||| ||| ||| | ||| ||| ||| | | | ||||||| ||
Sbjct 1641834 TAGACGGGGCCCAGGTCACCGACCTCGCGGTGGGTCAGGCCGACGCTGTCGAGGAACTCG 1641893
Query 146134 CGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAGCTCATTGGAGTCCG 146191
||||| || ||| ||||||||||||||||||| | ||| ||| | | |||| ||
Sbjct 1641894 CGGGAGCCATTGCCGTCCCAGATCTTGACGCCGACGTCGTTGAGGG--CGAGGGAGGACG 1641951
Query 146192 TGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGG 146251
|| ||| |||||||||||| ||||| ||| ||| | | |||||||| || |
Sbjct 1641952 TGTTGCCCTCGATGAACCAGAGGAGCTCGGCGATGACGGCACGGAGGAAGACCCGTTTTG 1642011
Query 146252 TGGTCAGCAGGGGGA 146266
| || ||||| ||||
Sbjct 1642012 TTGTGAGCAGAGGGA 1642026
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590076335314520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |