Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq7 122 6e-23 seq2 98.7 6e-16 seq3 82.4 5e-11 >seq7 Length=2414983 Score = 122 bits (134), Expect = 6e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||||||| | || || ||||| ||||||||||||||||| ||| | || Sbjct 116145 AGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGGCCATCC 116086 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||||| |||||||| || ||||||||||| || | || ||||||||| Sbjct 116085 TCGAGTTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 116026 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | || | ||||| || || || || | |||||||| Sbjct 116025 TGGATCTTGGACTTCACATTGTCGATGGTATCGGAAGACTCCACCTCGAGGGTGATGGTC 115966 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||||||||| || || || ||||| ||||| Sbjct 115965 TTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 115934 Score = 114 bits (126), Expect = 8e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||| |||||||| | ||| || ||||| |||||||||||||| Sbjct 819906 CCACCACGCAGGCGCAGGACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 819847 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| |||||| || ||||| || | ||||||||||| ||| Sbjct 819846 AGGGTTCGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCCGGGGGA 819787 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | | || | |||| || || || Sbjct 819786 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 819727 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| || || || ||||| || || || || ||||||||| Sbjct 819726 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATC 819679 >seq2 Length=3541710 Score = 98.7 bits (108), Expect = 6e-16 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261 ||||| |||||||||||||| || ||| | || || | ||||||||| || || || Sbjct 89112 TTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATC 89053 Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321 | ||||||||||| ||| | || ||||||||| ||||| ||| | || | | Sbjct 89052 AATCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 88993 Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAA 34380 |||| |||| || ||||| || | |||||||| ||||| || || || ||||| || Sbjct 88992 ATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 88934 >seq3 Length=3158035 Score = 82.4 bits (90), Expect = 5e-11 Identities = 133/189 (70%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 34202 TTCTGTATGTTGTAGTCGGACA-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAAT 34260 ||||| |||||||||||| || | || | |||| |||| |||||| || ||||| || Sbjct 1903400 TTCTGGATGTTGTAGTCGCTCAAGGTGT-GACCGTCTTCCAGCTGCTTACCAGCGAAGAT 1903458 Query 34261 GAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGC 34320 | ||||||||||| ||| | || ||| ||||| ||||| ||| | | | | Sbjct 1903459 TAAGCGCTGCTGGTCAGGGGGAATGCCCTCTTTGTCCTGAATCTTGGACTTGACGTTGTC 1903518 Query 34321 TATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAA 34380 || | |||| ||||| || | | || || || |||||||||||||| || || || Sbjct 1903519 GATGGTGTCGGAAGATTCCACCTTAAGGGTAATTGTCTTGCCGGTGAGAGTCTTGACGAA 1903578 Query 34381 GATCTGCAT 34389 ||||| || Sbjct 1903579 AATCTGTAT 1903587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071751941280