Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq7 122 7e-23
seq3 105 5e-18
>seq7
Length=2414983
Score = 122 bits (134), Expect = 7e-23
Identities = 97/117 (83%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
||||||||||| |||||||||||||| |||||||||||| ||| |||| |||| |||
Sbjct 116527 ACCAAGTGCAGTGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCGTCTTCC 116468
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| || || || || || ||||| ||||| ||||| ||||| | |||||||||||||
Sbjct 116467 AGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCC 116411
Score = 116 bits (128), Expect = 3e-21
Identities = 156/216 (72%), Gaps = 6/216 (3%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAG---TTGGCGATCGTCG 45184
|||| ||| || ||| ||||||||| |||||||||||| ||| | ||| ||| |||
Sbjct 116142 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGGCCATCCTCG 116083
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
||||| || || ||||| |||| ||||| ||||| ||||| | ||||||||||||
Sbjct 116082 ---AGTTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 116026
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
|| || ||| || | | | | || | ||||||||| | ||| || |||
Sbjct 116025 TGGATCTTGGACTTCACATTGTCGATGGTATCGGAAGACTCCACCTCGAGGGTGATGGTC 115966
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340
||||| || || ||||| || |||||||||||| ||
Sbjct 115965 TTGCCGGTGAGGGTCTTGACGAAGATTTGCATGGTG 115930
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || || ||||||||| |||||||||||| || || | || |||
Sbjct 819888 ACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCC 819829
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || ||||| ||||| ||||| ||||| || || | ||||||||||||
Sbjct 819828 AGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 819769
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | ||||||||| | ||| ||||||||
Sbjct 819768 ATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 819709
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCT 45343
||||| || ||||| || || || ||||| ||||||
Sbjct 819708 CCCGTGAGGGTCTTGACGAAAATCTGCATCTTGCCT 819673
>seq3
Length=3158035
Score = 105 bits (116), Expect = 5e-18
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 45139 CGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCC 45198
|||||||| |||||| |||||||||||| ||| | || |||| ||||| || || ||
Sbjct 1903390 CGTGCTCTTCTTCTGGATGTTGTAGTCGCTCAAGGTGTGACCGTCTTCCAGCTGCTTACC 1903449
Query 45199 GGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTT 45258
||||| || || ||||| ||||| || || | ||||| |||||| ||| || |||
Sbjct 1903450 AGCGAAGATTAAGCGCTGCTGGTCAGGGGGAATGCCCTCTTTGTCCTGAATCTTGGACTT 1903509
Query 45259 AACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGT 45318
|| | | | |||| | ||||||| | |||||| |||||||| || |||||
Sbjct 1903510 GACGTTGTCGATGGTGTCGGAAGATTCCACCTTAAGGGTAATTGTCTTGCCGGTGAGAGT 1903569
Query 45319 CTTCACAAAGATTTGCAT 45336
||| || || || || ||
Sbjct 1903570 CTTGACGAAAATCTGTAT 1903587
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395074896656323
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |