Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq4 342 5e-89
seq8 219 4e-52
seq7 100 3e-16
seq3 100 3e-16
>seq4
Length=2906552
Score = 342 bits (378), Expect = 5e-89
Identities = 1135/1746 (65%), Gaps = 38/1746 (2%)
Strand=Plus/Minus
Query 22247 GACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTA-CGCAT 22305
||||| |||||| || || || || ||||| || ||||| | | |||| | |||
Sbjct 974701 GACTGGGACTGATCAATGAAAGCACCACGATCAGCTGCCATCTGGA-CAATTTGGCGCTG 974643
Query 22306 CGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGATCCT 22365
|| || ||||| ||||||||||| || | |||| ||| || || ||| |
Sbjct 974642 AGAAATCTCCCAGACGGTCTTGTAAAGGGCCTTGATATCTTCGGGGATGTTGGGGATGTT 974583
Query 22366 CTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGAT 22425
||| | ||| ||||| | ||||| || || || | |||| ||| | ||| |
Sbjct 974582 CTGAATGGAGCCGTTCTCAGCAATGATACGGTTCTTCATGGCATCGGACCAGAGGCCGGT 974523
Query 22426 GGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCG 22485
| || || || |||| || |||| || ||||| |||||||||| | ||| ||
Sbjct 974522 GTCGACCAGGTCCTTGAGAAGCCAGGGGTTGACAACTTGGAACTCGCCGGCAAGGACACG 974463
Query 22486 GCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGC 22545
|| ||||| |||||||| ||| | || ||||| | || ||||| ||||| ||||| |
Sbjct 974462 TCGCTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGA 974403
Query 22546 GGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCT--TTGAA 22603
|| || || ||||| || || | || | ||| | | ||||||| ||||
Sbjct 974402 CGTACTGGCAGTTGGCATAGGGGCGAGGAGCAAGCTGTTGCGCGTACCGTGCTCCTTGA- 974344
Query 22604 ATTTTACTC-TTGAGCATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACAT 22662
| | ||| |||||| ||| |||||||| || || ||| | |||| |||||||
Sbjct 974343 --TCTGCTCCTTGAGCGAGTCCCACTCCCACAGGTCAGAGGGCTTGACAT---CCCACAT 974289
Query 22663 ATCGTATTGCAACACGCCG-CGACTCGCCGG-GCTGCCTTCGTACGTTTCGTACGGACCA 22720
||| |||| | | ||| || | || || | | |||| | | | |||||| |||||
Sbjct 974288 GTCGAATTGGAGGATGCCCTCGGAT-GCAGGTGATCCCTT-GAATGATTCGTAGGGACCC 974231
Query 22721 TATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATT 22780
| | | ||| | || ||||| | || | | || || ||||| |||||
Sbjct 974230 TCCACCTTGGCGATCTCCATAGAAGCCTCAAGGGCCGCATGGTAGATGGTCTCAAAGATC 974171
Query 22781 TTCTTGTTCAATT--CG-GCGGCGGCGACGCTTTCGTACGGCATACGCATCATCACGAAC 22837
| |||||||| | || || ||| || || | | ||||| |||| | |||
Sbjct 974170 TGCTTGTTCAGCTGACGAGCCTCGG-GAGACT--CAAAGGGCATGCGCAGGGCAAGGAAA 974114
Query 22838 GCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTT 22897
||||| || | |||||| || || | ||| || ||||||| || || || ||
Sbjct 974113 GCGTCGGCAAGACCCTGGACACCAACACCAATGGGTCGGTGGCGCATGTTG----CTGTT 974058
Query 22898 GC----CTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCAC 22953
|| ||| | | ||| || ||| ||| || | |||| | ||| | | ||
Sbjct 974057 GCGGGCCTCCTGGACAGGGTAGTGATTGACATCAATGATCTTGTTGAGGTTGCGGACAAC 973998
Query 22954 AATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCC--CGATTGTA--CAACAA 23009
| || || | | |||||| || ||| || ||||| | |||
Sbjct 973997 CACCTTGGTGACTTCATGAAGCTTCTTAAAGTCATAGCAGCCTTCG-TTGTAATCGACAT 973939
Query 23010 ACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACT 23069
| || ||| | ||||| | ||||| || || ||||| ||| | |||||
Sbjct 973938 AAGCAGGGAGGGCCAAAGAGGCCAAGTTGCAAACAGCAACCTCATCTGGAGCACAGTACT 973879
Query 23070 CTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTT 23129
| | ||| ||||| || || ||| | || || |||| || |||||||||| |
Sbjct 973878 CGATAATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCT 973819
Query 23130 TTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGA 23189
| || ||||| | |||||||||||||||| | || | || ||||| ||| | || |
Sbjct 973818 TGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCTTCCA 973759
Query 23190 TGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGT--ACCTGCCTTCTTCCTC 23247
||| | ||||| |||| ||| | | |||| || || | ||| |||| ||
Sbjct 973758 GGATGGAATACCACAGCTTCTGGGCGCGGATG-GTCGTGCGACCACGTCCCTCCTTC-TC 973701
Query 23248 GTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTG 23307
||||| | ||||| || || ||||| | || || ||||| || ||||| || |||
Sbjct 973700 ATACTTCTCATACAAAGCCTCGAATTCCTCGCCATAGCAGTCAGCAAGGCCAGGGCATTC 973641
Query 23308 CATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGG 23367
| || ||||| || |||| ||| |||||||| || |||| || ||||| ||
Sbjct 973640 GTTGGGGCACATCAGCGTCCAGTCCAAGTTCTTTTCAACACGCTTCATGAAGAGATCGGG 973581
Query 23368 TATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTT 23427
||||| ||||| ||||| || |||||||| ||||| || |||||| ||||||
Sbjct 973580 AATCCAGAGAGCAAGGAACAAGTCACGGGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCG 973521
Query 23428 CAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCC 23487
| ||| | || || || ||||| || ||||| ||||||||||| | |||||| || ||
Sbjct 973520 GAGATCAAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACC 973461
Query 23488 CGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCAT 23547
|| | ||| || || ||||||||||| || | ||| ||||||||| |||||| |||||
Sbjct 973460 AGGACGCTTGTTACCACCCTGATCGACATATCTGGCAGTGTTGTTGAACACTCGAAGCAT 973401
Query 23548 CGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAAC 23607
|| | | |||||| || | ||| ||| || | || || | || || |
Sbjct 973400 GGGAATAATACCGTTAGAGGTACCGTTGGTGCCAGCAATGTAAGAGCCGGTGGCACGGAT 973341
Query 23608 GTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAG 23667
| ||| |||| || || || || || || || || ||||| || ||| |||||
Sbjct 973340 GCGGTGGACGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACATGTCTTCAG 973281
Query 23668 AGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACAT 23727
|||||||||||| ||||| ||||| || || || | |||||||||| || || ||||
Sbjct 973280 AGTGTCGTAGATACCCTCAATGCTATCGTCCTTCATGTCGACCAAGAAGCATGAGGACAG 973221
Query 23728 TTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATT 23787
|| || | || ||| | || |||||| || ||| ||| || || ||| | |
Sbjct 973220 CTGGGCCTGCGGGGTACCTGCGTTGAACAGGGTGGGGGAGGCATGGGTGAAGAACTTGCT 973161
Query 23788 CGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGC 23847
||||| || ||||| || || | | | |||||||| ||||| || || | |
Sbjct 973160 GGACATGAGGTTGTATGTCTCCAGGACACGCTCAATGTCATCTCCCCAGATGCCAACAGA 973101
Query 23848 GACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATA 23907
|| ||||| ||||||| || || | ||| || | ||| | || || | || ||
Sbjct 973100 CACTCGCATAATCATGTGCTGTGGCCGCTCAACAATCTTGCCATCAAGCTTCAGAAGGTA 973041
Query 23908 TGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTAT 23967
||| |||| || || || || || || || | ||||| ||||| ||||||| || ||
Sbjct 973040 TGACCGTTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCGATCGTAGACAAT 972981
Query 23968 GGCCGA 23973
|| ||
Sbjct 972980 AGCGGA 972975
>seq8
Length=2103943
Score = 219 bits (242), Expect = 4e-52
Identities = 495/732 (68%), Gaps = 23/732 (3%)
Strand=Plus/Plus
Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629
|| ||| | |||||||| ||||| || || || || ||||||| |||||| | || |||
Sbjct 373459 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAAGAGATTGATCTG 373518
Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCCTC---AAAGAATCTGA-GAGAAAT--TTTATT 57683
|| ||||||||| ||| ||| | || | || || ||| ||||| | || ||
Sbjct 373519 TCCAAGGATCTGCACGACTGGAACAACCGCCTGAACGA---TGACGAGAAGTACTTCATC 373575
Query 57684 AAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAA 57743
||| | |||| || || ||||| || ||||| ||||| |||||||| |||||||
Sbjct 373576 TCTCACATCCTGGCCTTCTTTGCCGCCTCTGATGGCATTGTCAACGAGAACCTGGTCGAG 373635
Query 57744 AGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCC 57803
| ||| || || || | | ||||| ||||||| ||||| || || |
Sbjct 373636 CGCTTTAGTGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTACGGCTTCCAGATCATG 373695
Query 57804 ATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAAC 57863
|| || ||| | || || || | || || || ||||||||||| ||| | ||||| |||
Sbjct 373696 ATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGATACCTACATCAAGGAGAAC 373755
Query 57864 GACGAGAAACGTAGA---CTGTTCAACGCGATCGAAACAATGCCC-GCGATCGCCAAGAA 57919
| || || || || |||||||| || || || || || || |||| |||||
Sbjct 373756 AGCCAG---CGCAGCTACCTCTTCAACGCCATTGAGACCATTCCTTGCATTCGC-AAGAA 373811
Query 57920 GGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAAT 57979
||| || ||| | ||||| ||||| | | | | | || ||| || | || |
Sbjct 373812 GGCCGACTGGGCCATCAAGTGGATCCAGGACAAGAACTCTTCCTTTGCCCAGCGCCTGGT 373871
Query 57980 CGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGAT 58039
|| || |||||||| || ||||| ||||| || |||||| | || || ||| |
Sbjct 373872 TGCCTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCT 373931
Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099
||||| || || || ||||| || ||||| ||| ||||||| | || || || |||||
Sbjct 373932 CAAGAAGCGAGGTCTCATGCCTGGTCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGA 373991
Query 58100 GGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAAC-CGAC-G 58157
|||||| || || || ||||| ||||| || |||||||| |||| || | || | |
Sbjct 373992 GGGTCTGCACACCGACTTTGCCTGCCTGCTGCACTCTCAC---CTCAAGAACCGCGCCAG 374048
Query 58158 C-GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCAC 58216
| ||| ||| ||||| |||||||| || ||| || || | ||||| | ||
Sbjct 374049 CAAGGAAGTGATCCGTGACATCATCACCGATGCTGTCCGAATTGAGCAAGAGTTCTTGAC 374108
Query 58217 CGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGA 58276
||| || || || ||| | || || |||||| | ||||| ||||||||||
Sbjct 374109 CGAGGCTCTCCCTTGCGCCCTCCTTGGCATGAACTCCAACCTGATGAAGCAGTACATTGA 374168
Query 58277 GTTTGTTGCCGA 58288
||| || |||||
Sbjct 374169 GTTCGTCGCCGA 374180
>seq7
Length=2414983
Score = 100 bits (110), Expect = 3e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
||||||||| ||||| ||||| || || ||||| || |||||| |||| || || | ||
Sbjct 115933 CATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCTTC 115992
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||| | |||| | || || | || ||||||||| ||| | || || |||||
Sbjct 115993 CGATACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCA 116052
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
||||||||| || ||||||||||| || | || || ||| || ||| || ||
Sbjct 116053 GCAGCGTCTGATTTTCGCTGGCAAGCAACTCGAGGATGGCCGAACTCTGTCCGACTACAA 116112
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||| || || || || || || || ||||| ||
Sbjct 116113 CATCCAGAAGGAGTCCACCCTCCACCTGGTCCT 116145
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| ||||| || || || || ||||||||| | || || || |
Sbjct 819677 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 819736
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
||||||| |||| | ||||| | || ||||||||| ||| | || || |||
Sbjct 819737 TCCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGAC 819796
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|||||||| | || |||||||| || ||| |||| || || | ||| ||
Sbjct 819797 CAGCAGCGATTGATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGAACCCTCTCCGACTAC 819856
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||||| || || || || || || || ||||| || | ||| | || |||
Sbjct 819857 AACATCCAGAAGGAGTCTACCCTCCACCTGGTCCTGCGCCTGCGTGGTGGT 819907
>seq3
Length=3158035
Score = 100 bits (110), Expect = 3e-16
Identities = 135/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|| || |||||||| |||||||| || ||||| || || ||| | | || ||| | |||
Sbjct 1903587 ATACAGATTTTCGTCAAGACTCTCACCGGCAAGACAATTACCCTTAAGGTGGAATCTTCC 1903528
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || |||||| || ||| | || || ||||||
Sbjct 1903527 GACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAAGAGGGCATTCCCCCTGACCAG 1903468
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| |||| |||||||| || ||| |||||||| | || ||||||| || |||
Sbjct 1903467 CAGCGCTTAATCTTCGCTGGTAAGCAGCTGGAAGACGGTCACACCTTGAGCGACTACAAC 1903408
Query 31373 ATTCAAAA 31380
|| || ||
Sbjct 1903407 ATCCAGAA 1903400
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766048958960
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