Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq8 170 2e-37
seq4 125 9e-24
>seq8
Length=2103943
Score = 170 bits (188), Expect = 2e-37
Identities = 375/558 (67%), Gaps = 8/558 (1%)
Strand=Plus/Minus
Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641
|| || || ||| ||||||||||||||| | | || | ||||| ||||| || ||
Sbjct 374015 CAGGCAAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGA 373956
Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701
|| ||||| || || ||||| || ||||| || ||||| || || | ||| ||||||
Sbjct 373955 CCAGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAG 373896
Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCA---TAACCGGCGCTGTCATGT 33758
|| || || || || |||||||||| || | || || || | |||| ||
Sbjct 373895 ATACCCTCAACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGAAGAGTTCTTGTCCTGG 373836
Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33818
|||||||| ||||| ||||||||||| | ||||| || || || ||||| ||
Sbjct 373835 ATCCACTTGATGGCCCAGTCGGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTTG 373776
Query 33819 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33878
||||| ||| | | | | || || | || |||||||| | || || |
Sbjct 373775 AAGAGGTAGCTGCGCTGGCTGTTCTCCTTGATGTAGGTATCGATGAGCAGGGAGTAGGTC 373716
Query 33879 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33938
|| || || ||||| || || ||||| || |||||||| |||| |||||||| |||
Sbjct 373715 TCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCGGGGATC 373656
Query 33939 TGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCA 33998
|| || || || ||| || || | | || || || || || |||||| ||| |||
Sbjct 373655 TGGACCTCGCCACTAAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGGCGGCA 373596
Query 33999 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC-TGGTGTTA---GTTTATTCCA 34054
|| || |||| | || || || || || ||||| | || | | | || |||||
Sbjct 373595 AAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGT-TCAGGCGGTTGTTCCA 373537
Query 34055 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 34114
|| | | ||| || || | ||| | ||||| | ||||| || || ||||| |||||
Sbjct 373536 GTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCAGAAAGAGGCCTCGGCCTT 373477
Query 34115 TTTATACATATTCCAGAT 34132
|| ||||| | ||||||
Sbjct 373476 CTTGTACATTTGCCAGAT 373459
>seq4
Length=2906552
Score = 125 bits (138), Expect = 9e-24
Identities = 450/697 (65%), Gaps = 14/697 (2%)
Strand=Plus/Minus
Query 63221 AGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAA 63280
||| ||||| | || ||||||| || ||| || || | | || || ||||| ||
Sbjct 973649 AGGGCATTCGTTGGGGCACATCAGCGTCCAGTCCAAGTTCTTTTCAACACGCTTCATGAA 973590
Query 63281 GAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGT 63340
|||||| |||||||| ||||| | || | || | | | || || || ||
Sbjct 973589 GAGATCGGGAATCCAGAGAGCAAGGAACAAGTCACGGGCGCGGACCTCTTCCTTGCCGTG 973530
Query 63341 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 63400
||||| ||||| |||||| | | | || | ||||| || || | ||| |||||
Sbjct 973529 GTTCTTGCGGAGATCAAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGATGGC 973470
Query 63401 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 63460
| | ||||| || ||||| || |||||||| | ||||| || ||||| || | ||
Sbjct 973469 AAAGGCACCAGGACGCTTGTTACCACCCTGATCGACATATCTGGCAGTGTTGTTGAACAC 973410
Query 63461 TCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACT 63520
|| | ||| |||||||||||||| || |||| ||||| || | || || || |
Sbjct 973409 TCGAAGCATGGGAATAATACCGTTAGAGGTACCGTTGGTGCCAGCAATGTAAGAGCCGGT 973350
Query 63521 GGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 63578
|||||| || | || | || || || || || ||||| || || || | ||
Sbjct 973349 GGCACGGATGCGGTGGACGTTCA-AG-CCAATACCACCAGCCATCTTGGAAATCATGGCA 973292
Query 63579 CATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAA 63638
||| || | ||||| ||||| || || |||||||| || |||||| | | ||
Sbjct 973291 CATGTCTTCAGAGTGTCGTAGATACCCTCAATGCTATCGTCCTTCATGTCGACCAAGAAG 973232
Query 63639 CAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 63698
|| |||| ||| | | || || || || || | ||| || || || || ||
Sbjct 973231 CATGAGGACAGCTGGGCCTGCGGGGTACCTGCGTTGAACAGGGTGGGGGAGGCATGGGTG 973172
Query 63699 AACCATTTTTCAGAAAGTAGATTGTACGTCTC----AATAGCTGAGTCT-ATATCCCATT 63753
|| | || || | || ||||| ||||| | ||| | | | || ||||
Sbjct 973171 AAGAACTTGCTGGACATGAGGTTGTATGTCTCCAGGACACGCTCAATGTCATCTCCC-CA 973113
Query 63754 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGT 63813
|||| || || | || ||||| | ||||||||| || | |||||||| ||| |
Sbjct 973112 GATG----CCAACAGACACTCGCATAATCATGTGCTGTGGCCGCTCAACAATCTTGCCAT 973057
Query 63814 TTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 63873
| |||| | ||| || ||||||||| || || || || || | ||| ||||
Sbjct 973056 CAAGCTTCAGAAGGTATGACCGTTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGT 972997
Query 63874 CTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTT 63910
|||| ||||| | |||| | || | ||||| |||||
Sbjct 972996 CTCGATCGTAGACAATAGCGGAGTCGAGCTCCTCCTT 972960
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817104018640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |