Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq8 82.4 5e-11 >seq8 Length=2103943 Score = 82.4 bits (90), Expect = 5e-11 Identities = 268/414 (65%), Gaps = 8/414 (2%) Strand=Plus/Plus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 |||||||| || ||||| || || | || || | ||||| |||| |||||||| Sbjct 373873 GCCTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTC 373932 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 ||||| || |||||||| || || | |||||||||||| | || |||||||| Sbjct 373933 AAGAAGCGAGGTCTCATGCCTGGTCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGAG 373992 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTC-- 22927 ||||| ||| |||||||| || ||||| | | | ||| ||||| | | Sbjct 373993 GGTCTGCACACCGACTTTGCCTGCCTGCTG--CACTCTCACCTCAA--GAACCGCGCCAG 374048 Query 22928 --AGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCA 22985 |||| | | | | ||||| | ||||| || |||||| | ||||| Sbjct 374049 CAAGGAAGTGATCCGTGACATCATCACCGATGCTGTCCGAATTGAGCAAGAGTTCTTGAC 374108 Query 22986 AGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTACATACA 23045 ||||| || |||| ||||| ||||| || |||| | |||||| | Sbjct 374109 CGAGGCTCTCCCTTGCGCCCTCCTTGGCATGAACTCCAACCTGATGAAGCAGTACATTGA 374168 Query 23046 GTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCCAA 23105 ||| || || ||||| ||||| | || || || | | ||||| || || |||||| Sbjct 374169 GTTCGTCGCCGATCGTCTGCTTGTCGCTCTCGGCAACGAGAAGATCTACAAGTCTGCCAA 374228 Query 23106 TCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGA 23159 || || || |||||||| |||||| | | || || || |||||||| || Sbjct 374229 CCCCTTCGACTTCATGGAGAACATTTCTCTCGGTGGCAAGACCAACTTCTTCGA 374282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233326479389