Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq8 82.4 5e-11
>seq8
Length=2103943
Score = 82.4 bits (90), Expect = 5e-11
Identities = 268/414 (65%), Gaps = 8/414 (2%)
Strand=Plus/Plus
Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809
|||||||| || ||||| || || | || || | ||||| |||| ||||||||
Sbjct 373873 GCCTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTC 373932
Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869
||||| || |||||||| || || | |||||||||||| | || ||||||||
Sbjct 373933 AAGAAGCGAGGTCTCATGCCTGGTCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGAG 373992
Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTC-- 22927
||||| ||| |||||||| || ||||| | | | ||| ||||| | |
Sbjct 373993 GGTCTGCACACCGACTTTGCCTGCCTGCTG--CACTCTCACCTCAA--GAACCGCGCCAG 374048
Query 22928 --AGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCA 22985
|||| | | | | ||||| | ||||| || |||||| | |||||
Sbjct 374049 CAAGGAAGTGATCCGTGACATCATCACCGATGCTGTCCGAATTGAGCAAGAGTTCTTGAC 374108
Query 22986 AGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTACATACA 23045
||||| || |||| ||||| ||||| || |||| | |||||| |
Sbjct 374109 CGAGGCTCTCCCTTGCGCCCTCCTTGGCATGAACTCCAACCTGATGAAGCAGTACATTGA 374168
Query 23046 GTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCCAA 23105
||| || || ||||| ||||| | || || || | | ||||| || || ||||||
Sbjct 374169 GTTCGTCGCCGATCGTCTGCTTGTCGCTCTCGGCAACGAGAAGATCTACAAGTCTGCCAA 374228
Query 23106 TCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGA 23159
|| || || |||||||| |||||| | | || || || |||||||| ||
Sbjct 374229 CCCCTTCGACTTCATGGAGAACATTTCTCTCGGTGGCAAGACCAACTTCTTCGA 374282
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356233326479389
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |