Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq8 149 8e-31
seq4 131 2e-25
>seq8
Length=2103943
Score = 149 bits (164), Expect = 8e-31
Identities = 369/558 (66%), Gaps = 8/558 (1%)
Strand=Plus/Minus
Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124
|| || || ||| |||||||||||| || | | || | ||||||||||| || ||
Sbjct 374015 CAGGCAAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGA 373956
Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184
|| ||||| || || ||||| || ||||| || || || ||||| | || ||||||
Sbjct 373955 CCAGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAG 373896
Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCA---TAACCGGCACTGTCATGT 42241
|| || || || || |||||||||| || | || || || | |||| ||
Sbjct 373895 ATACCCTCAACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGAAGAGTTCTTGTCCTGG 373836
Query 42242 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 42301
|||||||| ||||| ||||||||||| | ||||| || || || ||||| ||
Sbjct 373835 ATCCACTTGATGGCCCAGTCGGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTTG 373776
Query 42302 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATT 42361
||||| ||| | | | | || || | || |||||||| | || || |
Sbjct 373775 AAGAGGTAGCTGCGCTGGCTGTTCTCCTTGATGTAGGTATCGATGAGCAGGGAGTAGGTC 373716
Query 42362 TCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACC 42421
|| || || ||||| || || ||||| || |||||||| |||| ||||||| | |
Sbjct 373715 TCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCGGGGATC 373656
Query 42422 TGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCA 42481
|| || || || ||| || || | | || ||||| || || || ||| ||| |||
Sbjct 373655 TGGACCTCGCCACTAAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGGCGGCA 373596
Query 42482 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA----TTTATTCCA 42537
|| || |||| | || || || || || |||| | ||| | || |||||
Sbjct 373595 AAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGT-CATCGTTCAGGCGGTTGTTCCA 373537
Query 42538 ATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTT 42597
|| | | ||| || || | ||| | ||||| | ||||| || || || || |||||
Sbjct 373536 GTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCAGAAAGAGGCCTCGGCCTT 373477
Query 42598 TTTATACATATTCCAGAT 42615
|| ||||| | ||||||
Sbjct 373476 CTTGTACATTTGCCAGAT 373459
>seq4
Length=2906552
Score = 131 bits (144), Expect = 2e-25
Identities = 455/701 (65%), Gaps = 18/701 (3%)
Strand=Plus/Minus
Query 71974 CCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTT--ACTCGTTTCA 72031
||||| ||||| || || ||||||| | ||| || || || ||| || || ||||
Sbjct 973651 CCAGGGCATTCGTTGGGGCACATCAGCGTCCAGTC--CAAGTTCTTTTCAACACGCTTCA 973594
Query 72032 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTC 72091
| |||||||| |||||||| ||||| | || | || | || | ||| || || |
Sbjct 973593 TGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAGTCACGGGCGCGGACCTCTTCCTTGC 973534
Query 72092 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 72151
| ||||| ||||| |||||| | | | || | ||||| || || | ||| |
Sbjct 973533 CGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGA 973474
Query 72152 TGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 72211
|||| | | || || || ||||| || |||||||| | ||||| || ||||| ||
Sbjct 973473 TGGCAAAGGCACCAGGACGCTTGTTACCACCCTGATCGACATATCTGGCAGTGTTGTTGA 973414
Query 72212 AAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTC 72271
| |||| | ||| ||||||||||| || || | ||| ||||| || | || || |
Sbjct 973413 ACACTCGAAGCATGGGAATAATACCGTTAGAGGTACCGTTGGTGCCAGCAATGTAAGAGC 973354
Query 72272 CACTGGCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 72329
| ||||||| || || || | || || || || || ||||| || || || |
Sbjct 973353 CGGTGGCACGGATGCGGTGGACGTTCA-AG-CCAATACCACCAGCCATCTTGGAAATCAT 973296
Query 72330 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 72389
|| ||| || | || || ||||| ||||| || ||||| ||| |||||| | |
Sbjct 973295 GGCACATGTCTTCAGAGTGTCGTAGATACCCTCAATGCTATCGTCCTTCATGTCGACCAA 973236
Query 72390 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 72449
|| || |||| ||| | || || || || || | ||| || || || ||
Sbjct 973235 GAAGCATGAGGACAGCTGGGCCTGCGGGGTACCTGCGTTGAACAGGGTGGGGGAGGCATG 973176
Query 72450 CGTAAACCATTTTTCAGACAGTAGATTGTACGTCTC----AATAGCTGATTCT-ATATCC 72504
|| || | || |||| || ||||| ||||| | ||| | | | || |||
Sbjct 973175 GGTGAAGAACTTGCTGGACATGAGGTTGTATGTCTCCAGGACACGCTCAATGTCATCTCC 973116
Query 72505 CATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTG 72564
| |||| || || | || ||||| | ||| ||||| || | ||||| ||||||
Sbjct 973115 C-CAGATG----CCAACAGACACTCGCATAATCATGTGCTGTGGCCGCTCAACAATCTTG 973061
Query 72565 TTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 72624
|| | |||| | ||| || ||||||||| || || || || || | |||
Sbjct 973060 CCATCAAGCTTCAGAAGGTATGACCGTTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTG 973001
Query 72625 AAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTT 72665
|||||||| ||||| | |||| | || | ||| | |||||
Sbjct 973000 AAGTCTCGATCGTAGACAATAGCGGAGTCGAGCTCCTCCTT 972960
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138671477880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |