Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq8 277 3e-69
seq4 150 3e-31
>seq8
Length=2103943
Score = 277 bits (306), Expect = 3e-69
Identities = 577/848 (68%), Gaps = 31/848 (4%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||| ||||| ||||||| || ||||| | ||||||| | ||||||
Sbjct 373459 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAAGAGATTGATCTG 373518
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAG----AGTTTAT 125134
|||||||| ||| |||| ||| | | || ||| || ||| |||| | || ||
Sbjct 373519 TCCAAGGATCTGCACGACTGGAACAACCGCCTGAACGA---TGA-CGAGAAGTACTTCAT 373574
Query 125135 ATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGAC 125194
|| ||||| ||||||||||||||| ||| ||||| || |||||||| || ||| |
Sbjct 373575 CTCTCACATCCTGGCCTTCTTTGCCGCCTCTGATGGCATTGTCAACGAGAACCTGGTCGA 373634
Query 125195 ACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCA 125253
|| || | ||| | || || |||| ||| ||||| ||||| ||||| ||||
Sbjct 373635 GCGCTTTAGTGGCGAGGTCCAGATCCCCGAGG-CTCGATGCTTCTACGGCTTCCAGATCA 373693
Query 125254 TGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT--TCGCGA 125311
|||| |||||| | ||||| || | ||||| || || || | ||||| | ||
Sbjct 373694 TGATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGATACCTACATCAAGGAGA 373753
Query 125312 TCCG-CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAA 125370
| | || || | || ||||| ||||| || || || | || | || || || |
Sbjct 373754 ACAGCCAGCGCAGCTAC---CTCTTCAACGCCATTGAGACCATTCCTTGCATTCGCAAGA 373810
Query 125371 AGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGG 125430
|||| | |||| || ||||||| | ||| | || ||||| | ||| | | ||||
Sbjct 373811 AGGCCGACTGGGCCATCAAGTGGATCCAGGACAAGAACTCTTCCTTTGCCCAGCGCCTGG 373870
Query 125431 TGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGC 125490
| || || |||||||| ||||| |||||||| ||| ||||| ||||||| ||||
Sbjct 373871 TTGCCTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGC 373930
Query 125491 TCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACG 125550
|||||||||| || |||||||| || ||||| |||||| | || ||||| ||||
Sbjct 373931 TCAAGAAGCGAGGTCTCATGCCTGGTCTGACCTTTTCCAACGAGCTCATCTCTCGTGACG 373990
Query 125551 AGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCA 125610
|||| || ||| ||||||||| || ||| ||| | | | | || |
Sbjct 373991 AGGGTCTGCACACCGACTTTGCCTGCCTGCTG------CACTCT---CACCTCAAGAACC 374041
Query 125611 GATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGT 125670
| ||||| | ||| | || |||| | |||||||| || | || || |||||||
Sbjct 374042 GCGCCAGCAAGGAAGTGATCCGTGACATCATCACCGATGCTGTCCGAATTGAGCAAGAGT 374101
Query 125671 TTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGT 125730
| | ||||| | || || | | | |||||||||||| ||| || ||| |||
Sbjct 374102 TCTTGACCGAGGCTCTCCCTTGCGCCCTCCTTGGCATGAACTCCAACCTGATGAAGCAGT 374161
Query 125731 ACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATTTACA 125787
|||| ||||| || || |||||||| || || | ||| || ||||| ||||
Sbjct 374162 ACATTGAGTTCGTCGCCGATCGTCTGCTTGTCG---CTCTCGGCAACGAGAAGATCTACA 374218
Query 125788 ACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTT 125847
| | || ||||| || |||||| | ||| || || | || ||||||||||| |
Sbjct 374219 AGTCTGCCAACCCCTTCGACTTCATGGAGAACATTTCTCTCGGTGGCAAGACCAACTTCT 374278
Query 125848 TCGAGAAG 125855
||||||||
Sbjct 374279 TCGAGAAG 374286
>seq4
Length=2906552
Score = 150 bits (166), Expect = 3e-31
Identities = 323/477 (68%), Gaps = 12/477 (3%)
Strand=Plus/Plus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| || || || || || || || | ||| ||||| | || || |||||||| |||
Sbjct 973440 CAGGGTGGTAACAAGCGTCCTGGTGCCTTTGCCATCTACCTCGAGCCCTGGCACGCCGAC 973499
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| ||||| || | || | ||||| ||| ||| ||||||| || ||| | |||
Sbjct 973500 GTCTTTGAGTTCCTTGATCTCCGCAAGAACCACGGCAAGGAAGAGGTCCGCGCCCGTGAC 973559
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT--CAACGACGGTGGCT 97053
||||| ||| |||||| | || ||| | ||||||||||| || || || |||
Sbjct 973560 TTGTTCCTTGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTTGAAAAGAACTTGG-- 973617
Query 97054 ACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGT 97113
|||||| || ||||||||| || | || || || | || |||| ||||| || |
Sbjct 973618 ACTGGACGCTGATGTGCCCCAACGAATGCCCTGGCCTTGCTGACTGCTATGGCGAGGAAT 973677
Query 97114 TTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGCAC 97173
| ||||| ||| | || ||| | ||||| || || |||| | || | |
Sbjct 973678 TCGAGGCTTTGTATGAGAAGTATGAGAAGGAGGGACG--TGGTCGCACGA--CCATCCGC 973733
Query 97174 G---AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATT 97229
| |||| |||||| | ||||| || || ||| |||||||| | || | |||
Sbjct 973734 GCCCAGAAGCTGTGGTATTCCATCCTGGAAGCCCAGACTGAGACTGGTAACCCCTTCATG 973793
Query 97230 CTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGC 97289
|||||||||||| || || ||||| |||||||| || |||| |||||| ||
Sbjct 973794 CTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAACCATCCGCAGC 973853
Query 97290 TCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGC 97346
||||| || ||||| || ||| | |||||| |||| || ||| || ||||||
Sbjct 973854 TCCAACCTCTGCACCGAGATTATCGAGTACTGTGCTCCAGATGAGGTTGCTGTTTGC 973910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058616415880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |